UniProt P63479
Alanine racemase 1 (P63479)
Alanine racemase 1 (UniProt P63479), EC 5.1.1.1: 8 experimental structures and 1 predicted model on GenesisL1, 6 ligands bound, 30 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P63479
- Protein
- Alanine racemase 1
- EC
- 5.1.1.1
- Experimental structures
- 8
- Predicted models
- 1
- Ligands
- 6
- Pockets
- 30 · 4 records with a druggable one
Structures
9 records of P63479 in the MolNFT archive: 8 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 4A3Q | The 2.15 Angstrom resolution crystal structure of Staphylococcus aureus alanine racemase | x-ray diffraction | A, B | PLP, SO4 | 7 (best 0.80) |
| 4A3Q | The 2.15 ångström resolution crystal structure of staphylococcus aureus alanine racemase | x-ray diffraction | A, B | — | — |
| 6G56 | Apo-structure of the alanine racemase from Staphylococcus aureus | x-ray diffraction | A, B | SO4 | 7 (best 0.81) |
| 6G56 | Apo-structure of the alanine racemase from staphylococcus aureus | x-ray diffraction | A, B | SO4 | — |
| 6G58 | Structure of the alanine racemase from Staphylococcus aureus in complex with a pyridoxal 5'… | x-ray diffraction | A, B | EOW, NA, CL | 8 (best 0.76) |
| 6G58 | Structure of the alanine racemase from staphylococcus aureus in complex with a pyridoxal 5'… | x-ray diffraction | A, B | EOW, NA, CL | — |
| 6G59 | Structure of the alanine racemase from Staphylococcus aureus in complex with an pyridoxal-6… | x-ray diffraction | A, B | EM2, SO4, NA, CL | 8 (best 0.80) |
| 6G59 | Structure of the alanine racemase from staphylococcus aureus in complex with an pyridoxal-6… | x-ray diffraction | A, B | EM2, SO4, NA, CL | — |
| P63479 | AlphaFold monomer V2.0 prediction for alanine racemase 1 (P63479) | predicted | A | — | — |
Ligands
- SO4 · Sulfate ion · in 5 records
- CL · Chloride ion · in 4 records
- NA · Sodium ion · in 4 records
- EM2 · (6-ethynyl-4-methanoyl-5-oxidanyl-pyridin-3-yl)methyl dihydrogen phosphate · in 2 records
- EOW · (6-but-3-ynyl-4-methyl-5-oxidanyl-pyridin-3-yl)methyl dihydrogen phosphate · in 2 records
- PLP · Pyridoxal-5'-phosphate · in 1 record
Experiment against prediction
- 6G58 chain A against the predicted model P63479: TM-score 1.00, RMSD 0.19 Å
- 6G58 chain A against the predicted model P63479: TM-score 1.00, RMSD 0.19 Å
- 6G59 chain A against the predicted model P63479: TM-score 0.99, RMSD 0.30 Å
- 6G59 chain A against the predicted model P63479: TM-score 0.99, RMSD 0.30 Å
- 4A3Q chain B against the predicted model P63479: TM-score 1.00, RMSD 0.38 Å
- 4A3Q chain B against the predicted model P63479: TM-score 1.00, RMSD 0.38 Å
- 6G58 chain B against the predicted model P63479: TM-score 1.00, RMSD 0.58 Å
- 6G58 chain B against the predicted model P63479: TM-score 1.00, RMSD 0.58 Å
- 4A3Q chain A against the predicted model P63479: TM-score 1.00, RMSD 0.45 Å
- 4A3Q chain A against the predicted model P63479: TM-score 1.00, RMSD 0.45 Å
Elsewhere
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