UniProt P59226
Histone H3.1 (P59226)
Histone H3.1 (UniProt P59226): 32 experimental structures and 1 predicted model on GenesisL1, 2 ligands bound, 53 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P59226
- Protein
- Histone H3.1
- Experimental structures
- 32
- Predicted models
- 1
- Ligands
- 2
- Pockets
- 53 · 6 records with a druggable one
Structures
33 records of P59226 in the MolNFT archive: 32 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 4IUR | crystal structure of SHH1 SAWADEE domain in complex with H3K9me3 peptide | x-ray diffraction | C | — | — |
| 4IUR | Crystal structure of SHH1 sawadee domain in complex with H3K9ME3 peptide | x-ray diffraction | C | — | — |
| 4IUT | crystal structure of SHH1 SAWADEE domain in complex with H3K9me2 peptide | x-ray diffraction | C | — | — |
| 4IUT | Crystal structure of SHH1 sawadee domain in complex with H3K9ME2 peptide | x-ray diffraction | C | — | — |
| 4IUU | Crystal structure of SHH1 SAWADEE domain in complex with H3K9me1 peptide | x-ray diffraction | C | — | — |
| 4IUU | Crystal structure of SHH1 sawadee domain in complex with H3K9ME1 peptide | x-ray diffraction | C | — | — |
| 4IUV | crystal structure of SHH1 SAWADEE domain in complex with H3K4me1K9me1 peptide | x-ray diffraction | C | — | — |
| 4IUV | Crystal structure of SHH1 sawadee domain in complex with H3K4ME1K9ME1 peptide | x-ray diffraction | C | — | — |
| 5VAH | Crystal structure of ATXR5 set domain in complex with histone H3 di- methylated on R26 | x-ray diffraction | C, D | — | — |
| 5VBC | Crystal structure of ATXR5 in complex with histone H3.1 | x-ray diffraction | C, D | — | — |
| 5VBC | Crystal structure of ATXR5 in complex with histone H3.1 | x-ray diffraction | C, D | — | — |
| 5YKO | Crystal structure of arabidopsis thaliana JMJ14 catalytic domain in complex with nog and H3K4ME3… | x-ray diffraction | P | OGA | — |
| 5Z8L | Crystal structure of arabidopsis thaliana ebs in complex with an H3K27ME3 peptide | x-ray diffraction | P | — | — |
| 5Z8N | Crystal structure of arabidopsis thaliana ebs C-terminal deletion construct in complex with an… | x-ray diffraction | P, Q, R | — | — |
| 5ZNP | Crystal structure of PtSHL in complex with an H3K4me3 peptide | x-ray diffraction | P, Q | — | 1 (best 0.73) |
| 5ZNP | Crystal structure of ptshl in complex with an H3K4ME3 peptide | x-ray diffraction | P, Q | — | — |
| 5ZNR | Crystal structure of PtSHL in complex with an H3K27me3 peptide | x-ray diffraction | P, Q | SO4 | 1 (best 0.37) |
| 5ZNR | Crystal structure of ptshl in complex with an H3K27ME3 peptide | x-ray diffraction | P, Q | SO4 | — |
| 5ZWX | Crystal structure of raphanus sativus AGDP1 AGD12 in complex with an H3K9ME2 peptide | x-ray diffraction | P, Q | — | — |
| 6IP4 | Crystal structure of Arabidopsis thaliana JMJ13 catalytic domain in complex with NOG and an… | x-ray diffraction | B | OGA | — |
| 6IP4 | Crystal structure of arabidopsis thaliana JMJ13 catalytic domain in complex with nog and an… | x-ray diffraction | B | OGA | — |
| 6LQE | Crystal structure of Arabidopsis ARID5 PHD finger in complex with H3K4me3 peptide | x-ray diffraction | P | — | — |
| 6LQE | Crystal structure of arabidopsis ARID5 phd finger in complex with H3K4ME3 peptide | x-ray diffraction | P | — | — |
| 6LQF | Crystal structure of arabidopsis ARID5 arid-phd cassette in complex with H3K4ME3 peptide and DNA | x-ray diffraction | P | — | — |
| 7CCE | crystal structure of Arabidopsis AIPP3 BAH domain in complex with an H3K27me3 peptide | x-ray diffraction | P | — | — |
| 7CCE | Crystal structure of arabidopsis AIPP3 bah domain in complex with an H3K27ME3 peptide | x-ray diffraction | P | — | — |
| 7DE9 | Crystal structure of arabidopsis RDM15 tudor domain in complex with an H3K4ME1 peptide | x-ray diffraction | P | — | — |
| 8J90 | Cryo-EM structure of DDM1-nucleosome complex | electron microscopy | A, E | — | 9 (best 0.83) |
| 8J91 | Cryo-EM structure of nucleosome containing Arabidopsis thaliana histones | electron microscopy | A, E | — | 10 (best 0.62) |
| 8WH5 | Structure of DDM1-nucleosome complex in the apo state | electron microscopy | A, E | — | 10 (best 0.70) |
| 8WH9 | Structure of DDM1-nucleosome complex in ADP-BeFx state | electron microscopy | A, E | — | 9 (best 0.86) |
| 8WHB | Structure of nucleosome core particle of Arabidopsis thaliana | electron microscopy | A, E | — | 13 (best 0.70) |
| P59226 | AlphaFold monomer V2.0 prediction for histone H3.2 (P59226) | predicted | A | — | — |
Ligands
Experiment against prediction
- 8J91 chain A against the predicted model P59226: TM-score 0.98, RMSD 0.42 Å
- 8J91 chain E against the predicted model P59226: TM-score 0.98, RMSD 0.65 Å
- 8WH9 chain A against the predicted model P59226: TM-score 0.97, RMSD 0.57 Å
- 8WHB chain A against the predicted model P59226: TM-score 0.97, RMSD 0.57 Å
- 8WHB chain E against the predicted model P59226: TM-score 0.97, RMSD 0.87 Å
- 8WH9 chain E against the predicted model P59226: TM-score 0.97, RMSD 0.87 Å
- 8WH5 chain A against the predicted model P59226: TM-score 0.96, RMSD 0.76 Å
- 8WH5 chain E against the predicted model P59226: TM-score 0.96, RMSD 0.72 Å
- 8J90 chain A against the predicted model P59226: TM-score 0.95, RMSD 0.70 Å
- 8J90 chain E against the predicted model P59226: TM-score 0.92, RMSD 1.01 Å
Elsewhere
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