UniProt P59206
Putative endo-beta-N-acetylglucosaminidase (P59206)
Putative endo-beta-N-acetylglucosaminidase (UniProt P59206), EC 3.2.1.96: 7 experimental structures and 1 predicted model on GenesisL1, 6 ligands bound, 16 pockets. Binding sites, druggability and experiment against prediction…
- UniProt
- P59206
- Protein
- Putative endo-beta-N-acetylglucosaminidase
- EC
- 3.2.1.96
- Experimental structures
- 7
- Predicted models
- 1
- Ligands
- 6
- Pockets
- 16 · 6 records with a druggable one
Structures
8 records of P59206 in the MolNFT archive: 7 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 7PJ3 | Crystal structure of catalytic domain in open conformation of LytB from Streptococcus pneumoniae | x-ray diffraction | AAA | CA | 1 (best 0.53) |
| 7PJ4 | Crystal structure of catalytic domain in closed conformation of LytB (E585Q)from Streptococcus… | x-ray diffraction | AAA | CA | 3 (best 0.52) |
| 7PJ5 | Crystal structure of catalytic domain of LytB from Streptococcus pneumoniae in complex with… | x-ray diffraction | AAA | NAG, CA | 3 (best 0.53) |
| 7PJ6 | Crystal structure of catalytic domain of LytB (E585Q) from Streptococcus pneumoniae in complex with… | x-ray diffraction | AAA | NAG, AMU, CA | 3 (best 0.51) |
| 7PL2 | Crystal structure of choline-binding module of LytB from Streptococcus pneumoniae | x-ray diffraction | A | CHT | — |
| 7PL5 | Crystal structure of choline-binding module (R1-R9) of LytB from Streptococcus pneumoniae | x-ray diffraction | AAA, BBB | CHT, ZN | 2 (best 0.64) |
| 7POD | Crystal structure of catalytic domain of LytB (E585Q) from Streptococcus pneumoniae in complex with… | x-ray diffraction | A | AMV, NAG, AMU, CA | 4 (best 0.52) |
| P59206 | AlphaFold monomer V2.0 prediction for putative endo-beta-N- acetylglucosaminidase (P59206) | predicted | A | — | — |
Ligands
Experiment against prediction
- 7PJ6 chain AAA against the predicted model P59206: TM-score 0.98, RMSD 0.87 Å
- 7POD chain A against the predicted model P59206: TM-score 0.98, RMSD 0.87 Å
- 7PJ4 chain AAA against the predicted model P59206: TM-score 0.98, RMSD 0.95 Å
- 7PJ3 chain AAA against the predicted model P59206: TM-score 0.96, RMSD 1.36 Å
- 7PJ5 chain AAA against the predicted model P59206: TM-score 0.96, RMSD 1.27 Å
- 7PL5 chain AAA against the predicted model P59206: TM-score 0.89, RMSD 1.87 Å
- 7PL5 chain BBB against the predicted model P59206: TM-score 0.87, RMSD 2.12 Å
- 7PL2 chain A against the predicted model P59206: TM-score 0.81, RMSD 2.58 Å
Elsewhere
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