UniProt P52874
P52874
P52874 (UniProt P52874): 16 experimental structures and 1 predicted model on GenesisL1. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P52874
- Experimental structures
- 16
- Predicted models
- 1
Structures
17 records of P52874 in the MolNFT archive: 16 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 4OHV | C. Elegans Clp1 bound to AMP-PNP, and Mg2+ | x-ray diffraction | A | — | — |
| 4OHV | C. elegans CLP1 bound to AMP-pnp, and MG2+ | x-ray diffraction | A | — | — |
| 4OHW | C. Elegans Clp1 bound to ATP, and Mn2+(ATP-bound state) | x-ray diffraction | A | — | — |
| 4OHW | C. elegans CLP1 bound to ATP, and MN2+(ATP-bound state) | x-ray diffraction | A | — | — |
| 4OHX | C. Elegans Clp1 bound to ADP and Mg2+ (RNA released state) | x-ray diffraction | A | — | — |
| 4OHX | C. elegans CLP1 bound to ADP and MG2+ (RNA released state) | x-ray diffraction | A | — | — |
| 4OHY | C. Elegans Clp1 bound to ssRNA dinucleotide GC, AMP-PNP, and Mg2+(inhibited substrate bound state) | x-ray diffraction | A | — | — |
| 4OHY | C. elegans CLP1 bound to ssrna dinucleotide gc, AMP-pnp, and MG2+(INHIBITED substrate bound state) | x-ray diffraction | A | — | — |
| 4OHZ | bound to ssRNA tetranucleotide GAAA, ADP, and Mg2+ | x-ray diffraction | A | — | — |
| 4OHZ | Bound to ssrna tetranucleotide gaaa, ADP, and MG2+ | x-ray diffraction | A | — | — |
| 4OI0 | bound to ssRNA dinucleotide GC, ADP, AlF4-, and Mg2+(transition state, data set I) | x-ray diffraction | A | — | — |
| 4OI0 | Bound to ssrna dinucleotide gc, ADP, ALF4-, and MG2+(TRANSITION state, data set I) | x-ray diffraction | A | — | — |
| 4OI1 | Clp1 bound to ssRNA dinucleotide GC, ADP, AlF4-, and Mg2+(transition state, data set II) | x-ray diffraction | A | — | — |
| 4OI1 | CLP1 bound to ssrna dinucleotide gc, ADP, ALF4-, and MG2+(TRANSITION state, data set II) | x-ray diffraction | A | — | — |
| 4OI2 | C. Elegans Clp1 and ADP and Mg2+ (turnover state) | x-ray diffraction | A | — | — |
| 4OI2 | C. elegans CLP1 and ADP and MG2+ (turnover state) | x-ray diffraction | A | — | — |
| P52874 | AlphaFold monomer V2.0 prediction for protein clpf-1 (P52874) | predicted | A | — | — |
Experiment against prediction
- 4OHV chain A against the predicted model P52874: TM-score 0.99, RMSD 0.61 Å
- 4OHV chain A against the predicted model P52874: TM-score 0.99, RMSD 0.61 Å
- 4OI1 chain A against the predicted model P52874: TM-score 0.99, RMSD 0.56 Å
- 4OI1 chain A against the predicted model P52874: TM-score 0.99, RMSD 0.56 Å
- 4OHW chain A against the predicted model P52874: TM-score 0.99, RMSD 0.58 Å
- 4OHW chain A against the predicted model P52874: TM-score 0.99, RMSD 0.58 Å
- 4OHY chain A against the predicted model P52874: TM-score 0.99, RMSD 0.70 Å
- 4OHY chain A against the predicted model P52874: TM-score 0.99, RMSD 0.70 Å
- 4OI2 chain A against the predicted model P52874: TM-score 0.99, RMSD 0.67 Å
- 4OI2 chain A against the predicted model P52874: TM-score 0.99, RMSD 0.67 Å
Elsewhere
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