UniProt P51996
GTP-binding protein YPT32/YPT11 (P51996)
GTP-binding protein YPT32/YPT11 (UniProt P51996): 9 experimental structures and 1 predicted model on GenesisL1, 7 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P51996
- Protein
- GTP-binding protein YPT32/YPT11
- Experimental structures
- 9
- Predicted models
- 1
- Pockets
- 7 · 3 records with a druggable one
Structures
10 records of P51996 in the MolNFT archive: 9 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 3RWM | Crystal Structure of Ypt32 in Complex with GppNHp | x-ray diffraction | B | — | — |
| 3RWM | Crystal structure of YPT32 in complex with gppnhp | x-ray diffraction | B | — | — |
| 3RWO | Crystal structure of YPT32 in complex with GDP | x-ray diffraction | B, A | — | — |
| 3RWO | Crystal structure of YPT32 in complex with GDP | x-ray diffraction | B, A | — | — |
| 7E8T | Monomer of Ypt32-TRAPPII | electron microscopy | L | — | 2 (best 0.78) |
| 7E8T | Monomer of YPT32-trappii | electron microscopy | L | — | — |
| 7EA3 | Intact YPT32-trappii (dimer). | electron microscopy | L, Y | — | — |
| 7U05 | Structure of the yeast TRAPPII-Rab11/Ypt32 complex in the closed/closed state (composite structure) | electron microscopy | L, l | — | 2 (best 0.77) |
| 7U06 | Structure of the yeast TRAPPII-Rab11/Ypt32 complex in the closed/open state (composite structure) | electron microscopy | l | — | 1 (best 0.75) |
| P51996 | AlphaFold monomer V2.0 prediction for GTP-binding protein YPT32/YPT11 (P51996) | predicted | A | — | 2 (best 0.48) |
Experiment against prediction
- 3RWO chain A against the predicted model P51996: TM-score 0.94, RMSD 1.46 Å
- 3RWO chain A against the predicted model P51996: TM-score 0.94, RMSD 1.46 Å
- 3RWO chain B against the predicted model P51996: TM-score 0.94, RMSD 1.63 Å
- 3RWO chain B against the predicted model P51996: TM-score 0.94, RMSD 1.63 Å
- 3RWM chain B against the predicted model P51996: TM-score 0.93, RMSD 1.63 Å
- 3RWM chain B against the predicted model P51996: TM-score 0.93, RMSD 1.63 Å
- 7E8T chain L against the predicted model P51996: TM-score 0.80, RMSD 2.04 Å
- 7E8T chain L against the predicted model P51996: TM-score 0.80, RMSD 2.04 Å
- 7EA3 chain L against the predicted model P51996: TM-score 0.80, RMSD 2.23 Å
- 7U05 chain L against the predicted model P51996: TM-score 0.80, RMSD 2.20 Å
Elsewhere
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