UniProt P50743
GTPase Der (P50743)
GTPase Der (UniProt P50743): 14 experimental structures and 1 predicted model on GenesisL1, 6 ligands bound, 3 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P50743
- Protein
- GTPase Der
- Experimental structures
- 14
- Predicted models
- 1
- Ligands
- 6
- Pockets
- 3 · 2 records with a druggable one
Structures
15 records of P50743 in the MolNFT archive: 14 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 2HJG | The crystal structure of the B. subtilis YphC GTPase in complex with GDP | x-ray diffraction | A | — | — |
| 2HJG | The crystal structure of the B. subtilis yphc GTPase in complex with GDP | x-ray diffraction | A | — | — |
| 4DCS | Crystal Structure of B. subtilis EngA in complex with sulfate ion and GDP | x-ray diffraction | A | — | — |
| 4DCS | Crystal structure of B. subtilis enga in complex with sulfate ion and GDP | x-ray diffraction | A | — | — |
| 4DCT | Crystal Structure of B. subtilis EngA in complex with half-occupacy GDP | x-ray diffraction | A | — | — |
| 4DCT | Crystal structure of B. subtilis enga in complex with half-occupacy GDP | x-ray diffraction | A | — | — |
| 4DCU | Crystal Structure of B. subtilis EngA in complex with GDP | x-ray diffraction | A | — | — |
| 4DCU | Crystal structure of B. subtilis enga in complex with GDP | x-ray diffraction | A | — | — |
| 4DCV | Crystal Structure of B. subtilis EngA in complex with GMPPCP | x-ray diffraction | A | — | — |
| 4DCV | Crystal structure of B. subtilis enga in complex with gmppcp | x-ray diffraction | A | — | — |
| 5M7H | Crystal structure of bacillus subtilis enga in complex with phosphate ion and gmppnp | x-ray diffraction | A | PO4, GNP, K | — |
| 5X4B | Crystal structure of N-terminal G-domain of enga from bacillus subtilis | x-ray diffraction | A, B | GDP, K, MG, NA | — |
| 9BS0 | YphC-treated 45SYphC particle. Class 5 | electron microscopy | W | GNP | 1 (best 0.76) |
| 9BSL | 45SRbgA particle in complex with RbgA and YphC. Class A | electron microscopy | W | GNP | 2 (best 0.79) |
| P50743 | AlphaFold monomer V2.0 prediction for GTPase der (P50743) | predicted | A | — | — |
Ligands
Experiment against prediction
- 5X4B chain B against the predicted model P50743: TM-score 0.99, RMSD 0.53 Å
- 5X4B chain A against the predicted model P50743: TM-score 0.94, RMSD 1.42 Å
- 4DCV chain A against the predicted model P50743: TM-score 0.65, RMSD 1.97 Å
- 4DCV chain A against the predicted model P50743: TM-score 0.65, RMSD 1.97 Å
- 4DCU chain A against the predicted model P50743: TM-score 0.65, RMSD 1.88 Å
- 4DCU chain A against the predicted model P50743: TM-score 0.65, RMSD 1.88 Å
- 4DCT chain A against the predicted model P50743: TM-score 0.65, RMSD 1.86 Å
- 4DCT chain A against the predicted model P50743: TM-score 0.65, RMSD 1.86 Å
- 2HJG chain A against the predicted model P50743: TM-score 0.65, RMSD 1.84 Å
- 2HJG chain A against the predicted model P50743: TM-score 0.65, RMSD 1.84 Å
Elsewhere
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