UniProt P39008
POLY(A) ribonuclease POP2 (P39008)
POLY(A) ribonuclease POP2 (UniProt P39008): 6 experimental structures and 1 predicted model on GenesisL1, 6 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P39008
- Protein
- POLY(A) ribonuclease POP2
- Experimental structures
- 6
- Predicted models
- 1
- Pockets
- 6 · 1 record with a druggable one
Structures
7 records of P39008 in the MolNFT archive: 6 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1UOC | X-ray structure of the RNase domain of the yeast Pop2 protein | x-ray diffraction | A, B | — | — |
| 1UOC | X-ray structure of the RNase domain of the yeast POP2 protein | x-ray diffraction | A, B | — | — |
| 4B8A | Structure of yeast NOT1 MIF4G domain co-crystallized with CAF1 | x-ray diffraction | B | — | — |
| 4B8A | Structure of yeast NOT1 MIF4G domain co-crystallized with CAF1 | x-ray diffraction | B | — | — |
| 4B8C | nuclease module of the yeast Ccr4-Not complex | x-ray diffraction | A, C, E, F | — | — |
| 4B8C | Nuclease module of the yeast CCR4-not complex | x-ray diffraction | A, C, E, F | — | — |
| P39008 | AlphaFold monomer V2.0 prediction for POLY(A) ribonuclease POP2 (P39008) | predicted | A | — | 6 (best 0.71) |
Experiment against prediction
- 4B8C chain A against the predicted model P39008: TM-score 0.99, RMSD 0.58 Å
- 4B8C chain A against the predicted model P39008: TM-score 0.99, RMSD 0.58 Å
- 4B8A chain B against the predicted model P39008: TM-score 0.97, RMSD 1.20 Å
- 4B8A chain B against the predicted model P39008: TM-score 0.97, RMSD 1.20 Å
- 1UOC chain A against the predicted model P39008: TM-score 0.97, RMSD 1.43 Å
- 1UOC chain A against the predicted model P39008: TM-score 0.97, RMSD 1.43 Å
- 1UOC chain B against the predicted model P39008: TM-score 0.96, RMSD 1.54 Å
- 1UOC chain B against the predicted model P39008: TM-score 0.96, RMSD 1.54 Å
Elsewhere
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