UniProt P27490
P27490
P27490 (UniProt P27490): 5 experimental structures and 1 predicted model on GenesisL1, 6 ligands bound. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P27490
- Experimental structures
- 5
- Predicted models
- 1
- Ligands
- 6
Structures
6 records of P27490 in the MolNFT archive: 5 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5XNL | Structure of stacked C2S2M2-type psii-lhcii supercomplex from pisum sativum | electron microscopy | 1, 2, G, N, Y, 5, 6, g, n, y | CHL, CLA, LUT, XAT, NEX, LHG | — |
| 5XNM | Structure of unstacked C2S2M2-type psii-lhcii supercomplex from pisum sativum | electron microscopy | 1, 2, G, N, Y, 5, 6, g, n, y | CHL, CLA, LUT, XAT, NEX, LHG | — |
| 5XNN | Structure of M-lhcii and CP24 complexes in the stacked C2S2M2-type psii-lhcii supercomplex from… | electron microscopy | 1, 2 | CHL, CLA, LUT, XAT, NEX, LHG | — |
| 5XNO | Structure of M-lhcii and CP24 complexes in the unstacked C2S2M2-type psii-lhcii supercomplex from… | electron microscopy | 1, 2 | CHL, CLA, LUT, XAT, NEX, LHG | — |
| 6YP7 | Psii-lhcii C2S2 supercomplex from pisum sativum grown in high light conditions | electron microscopy | g, n, y, G, N, Y | CHL, CLA, LUT, XAT, NEX, LHG | — |
| P27490 | AlphaFold monomer V2.0 prediction for chlorophyll a-B binding protein 8, chloroplastic (P27490) | predicted | A | — | — |
Ligands
- CHL · Chlorophyll B · in 5 records
- CLA · Chlorophyll A · in 5 records
- LHG · 1,2-dipalmitoyl-phosphatidyl-glycerole · in 5 records
- LUT · (3R,3'R,6S)-4,5-didehydro-5,6-dihydro-beta,beta-carotene-3,3'-diol · in 5 records
- NEX · (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R, 6R)-4-hydroxy-2,2,6-trimethyl-7-oxabicyclo[4.1.0]hept-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13, 15,17-nonaenylidene}-1,5,5-trimethylcyclohexane-1,3-diol · in 5 records
- XAT · (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-diepoxy-5,6,5',6'-tetrahydro-beta,beta-carotene-3,3'-diol · in 5 records
Experiment against prediction
- 5XNM chain G against the predicted model P27490: TM-score 0.99, RMSD 0.47 Å
- 5XNM chain g against the predicted model P27490: TM-score 0.99, RMSD 0.47 Å
- 5XNM chain N against the predicted model P27490: TM-score 0.99, RMSD 0.48 Å
- 5XNM chain n against the predicted model P27490: TM-score 0.99, RMSD 0.48 Å
- 5XNL chain n against the predicted model P27490: TM-score 0.99, RMSD 0.49 Å
- 5XNL chain N against the predicted model P27490: TM-score 0.99, RMSD 0.49 Å
- 5XNM chain Y against the predicted model P27490: TM-score 0.99, RMSD 0.50 Å
- 5XNM chain y against the predicted model P27490: TM-score 0.99, RMSD 0.50 Å
- 5XNL chain Y against the predicted model P27490: TM-score 0.99, RMSD 0.50 Å
- 5XNL chain y against the predicted model P27490: TM-score 0.99, RMSD 0.50 Å
Elsewhere
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