UniProt P12333
Chlorophyll a-b binding protein, chloroplastic (P12333)
Chlorophyll a-b binding protein, chloroplastic (UniProt P12333): 9 experimental structures and 1 predicted model on GenesisL1, 7 ligands bound, 72 pockets. Binding sites, druggability and experiment against prediction (TM-score)…
- UniProt
- P12333
- Protein
- Chlorophyll a-b binding protein, chloroplastic
- Experimental structures
- 9
- Predicted models
- 1
- Ligands
- 7
- Pockets
- 72 · 5 records with a druggable one
Structures
10 records of P12333 in the MolNFT archive: 9 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1RWT | Crystal Structure of Spinach Major Light-harvesting complex at 2.72 Angstrom Resolution | x-ray diffraction | A, B, C, D, E, F, G, H, I, J | — | — |
| 1RWT | Crystal structure of spinach major light-harvesting complex at 2.72 ångström resolution | x-ray diffraction | A, B, C, D, E, F, G, H, I, J | — | — |
| 3JCU | Cryo-EM structure of spinach PSII-LHCII supercomplex at 3.2 Angstrom resolution | electron microscopy | G, N, Y, g, n, y | — | — |
| 3JCU | Cryo-EM structure of spinach psii-lhcii supercomplex at 3.2 ångström resolution | electron microscopy | G, N, Y, g, n, y | — | — |
| 8IWZ | Cryo-EM structure of unprotonated LHCII in detergent solution at low pH value | electron microscopy | N, G, Y | CHL, CLA, LUT, NEX, LHG, XAT | 13 (best 0.69) |
| 8IX0 | Cryo-EM structure of unprotonated LHCII nanodisc at high pH value | electron microscopy | N, G, Y | CHL, CLA, LUT, NEX, LHG, XAT | 16 (best 0.73) |
| 8IX2 | Cryo-EM structure of unprotonated LHCII nanodisc at low pH value | electron microscopy | N, G, Y | CHL, CLA, LUT, NEX, LHG, XAT | 14 (best 0.68) |
| 8Y15 | Cryo-EM structure of Light-harvesting complex from Spinacia oleracea | electron microscopy | A, B, C | CHL, CLA, A1LXP, NEX, LHG, XAT | 16 (best 0.61) |
| 8YEE | Cryo-EM structure of in vitro reconstituted Light-harvesting complex II trimer | electron microscopy | A, B, C | CHL, CLA, A1LXP, NEX, LHG | 13 (best 0.57) |
| P12333 | AlphaFold monomer V2.0 prediction for chlorophyll a-B binding protein, chloroplastic (P12333) | predicted | A | — | — |
Ligands
- CHL · Chlorophyll B · in 5 records
- CLA · Chlorophyll A · in 5 records
- LHG · 1,2-dipalmitoyl-phosphatidyl-glycerole · in 5 records
- NEX · (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R, 6R)-4-hydroxy-2,2,6-trimethyl-7-oxabicyclo[4.1.0]hept-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13, 15,17-nonaenylidene}-1,5,5-trimethylcyclohexane-1,3-diol · in 5 records
- XAT · (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-diepoxy-5,6,5',6'-tetrahydro-beta,beta-carotene-3,3'-diol · in 4 records
- LUT · (3R,3'R,6S)-4,5-didehydro-5,6-dihydro-beta,beta-carotene-3,3'-diol · in 3 records
- A1LXP · Lutein · in 2 records
Experiment against prediction
- 1RWT chain I against the predicted model P12333: TM-score 1.00, RMSD 0.26 Å
- 1RWT chain I against the predicted model P12333: TM-score 1.00, RMSD 0.26 Å
- 1RWT chain D against the predicted model P12333: TM-score 1.00, RMSD 0.26 Å
- 1RWT chain D against the predicted model P12333: TM-score 1.00, RMSD 0.26 Å
- 1RWT chain A against the predicted model P12333: TM-score 1.00, RMSD 0.26 Å
- 1RWT chain A against the predicted model P12333: TM-score 1.00, RMSD 0.26 Å
- 1RWT chain G against the predicted model P12333: TM-score 1.00, RMSD 0.26 Å
- 1RWT chain G against the predicted model P12333: TM-score 1.00, RMSD 0.26 Å
- 1RWT chain B against the predicted model P12333: TM-score 1.00, RMSD 0.26 Å
- 1RWT chain B against the predicted model P12333: TM-score 1.00, RMSD 0.26 Å
Elsewhere
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