UniProt P10898
Photosystem II CP43 reaction center protein (P10898)
Photosystem II CP43 reaction center protein (UniProt P10898): 7 experimental structures and 1 predicted model on GenesisL1, 9 ligands bound, 65 pockets. Binding sites, druggability and experiment against prediction (TM-score) in…
- UniProt
- P10898
- Protein
- Photosystem II CP43 reaction center protein
- Experimental structures
- 7
- Predicted models
- 1
- Ligands
- 9
- Pockets
- 65 · 8 records with a druggable one
Structures
8 records of P10898 in the MolNFT archive: 7 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 6KAC | Cryo-EM structure of the C2S2-type PSII-LHCII supercomplex from Chlamydomonas reihardtii | electron microscopy | C, c | OEX, CL, SQD, LMG, CLA, BCR | 9 (best 0.87) |
| 6KAC | Cryo-EM structure of the C2S2-type psii-lhcii supercomplex from chlamydomonas reihardtii | electron microscopy | C, c | OEX, CL, SQD, LMG, CLA, BCR | 9 (best 0.87) |
| 6KAD | Cryo-EM structure of the C2S2M2L2-type PSII-LHCII supercomplex from Chlamydomonas reihardtii | electron microscopy | C, c | OEX, CL, SQD, LMG, CLA, BCR | 5 (best 0.86) |
| 6KAF | C2S2M2N2-type PSII-LHCII | electron microscopy | C, c | CL, SQD, LHG, BCR, LMG, DGD | 11 (best 0.86) |
| 8KDE | Cryo-EM structure of an intermediate-state complex during the process of photosystem II repair | electron microscopy | C | LHG, BCR, LMG, CLA, DGD, SQD | 8 (best 0.86) |
| 8R2I | Cryo-EM Structure of native Photosystem II assembly intermediate from Chlamydomonas reinhardtii | electron microscopy | C | CLA, BCR, DGD | 9 (best 0.80) |
| 8ZEE | Cryo-EM structure of an intermediate-state PSII-PRF2' complex during the process of photosystem II… | electron microscopy | C | LHG, LMG, BCR, CLA, DGD, SQD | 9 (best 0.84) |
| P10898 | AlphaFold monomer V2.0 prediction for photosystem II CP43 reaction center protein (P10898) | predicted | A | — | 5 (best 0.63) |
Ligands
- BCR · Beta-carotene · in 7 records
- CLA · Chlorophyll A · in 7 records
- DGD · Digalactosyl diacyl glycerol (dgdg) · in 7 records
- LHG · 1,2-dipalmitoyl-phosphatidyl-glycerole · in 6 records
- LMG · 1,2-distearoyl-monogalactosyl-diglyceride · in 6 records
- SQD · 1,2-di-O-acyl-3-O-[6-deoxy-6-sulfo-alpha-D-glucopyranosyl]-sn-glycerol · in 6 records
- CL · Chloride ion · in 4 records
- OEX · Ca-MN4-O5 cluster · in 3 records
- LMU · Dodecyl-alpha-D-maltoside · in 2 records
Experiment against prediction
- 6KAC chain C against the predicted model P10898: TM-score 0.99, RMSD 0.67 Å
- 6KAC chain C against the predicted model P10898: TM-score 0.99, RMSD 0.67 Å
- 6KAD chain C against the predicted model P10898: TM-score 0.99, RMSD 0.69 Å
- 6KAF chain C against the predicted model P10898: TM-score 0.99, RMSD 0.71 Å
- 6KAF chain c against the predicted model P10898: TM-score 0.99, RMSD 0.71 Å
- 8KDE chain C against the predicted model P10898: TM-score 0.99, RMSD 0.79 Å
- 8ZEE chain C against the predicted model P10898: TM-score 0.99, RMSD 0.90 Å
- 8R2I chain C against the predicted model P10898: TM-score 0.98, RMSD 1.17 Å
Elsewhere
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.