UniProt P0AFY6
Peptide antibiotic transporter SbmA (P0AFY6)
Peptide antibiotic transporter SbmA (UniProt P0AFY6): 2 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 15 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P0AFY6
- Protein
- Peptide antibiotic transporter SbmA
- Experimental structures
- 2
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 15 · 2 records with a druggable one
Structures
3 records of P0AFY6 in the MolNFT archive: 2 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 7P34 | Cryo-EM structure of the proton-dependent antibacterial peptide transporter SbmA-FabS11-1 in… | electron microscopy | A, B | PGW | 12 (best 0.87) |
| 7P34 | Cryo-EM structure of the proton-dependent antibacterial peptide transporter sbma-FABS11-1 in… | electron microscopy | A, B | PGW | — |
| P0AFY6 | AlphaFold monomer V2.0 prediction for peptide antibiotic transporter sbma (P0AFY6) | predicted | A | — | 3 (best 0.79) |
Ligands
- PGW · (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy) phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate · in 2 records
Experiment against prediction
- 7P34 chain A against the predicted model P0AFY6: TM-score 0.75, RMSD 4.58 Å
- 7P34 chain A against the predicted model P0AFY6: TM-score 0.75, RMSD 4.58 Å
- 7P34 chain B against the predicted model P0AFY6: TM-score 0.75, RMSD 4.58 Å
Elsewhere
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