UniProt P0A9P6
ATP-dependent RNA helicase DeaD (P0A9P6)
ATP-dependent RNA helicase DeaD (UniProt P0A9P6), EC 3.6.4.13: 6 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 6 pockets. Binding sites, druggability and experiment against prediction (TM-score) in…
- UniProt
- P0A9P6
- Protein
- ATP-dependent RNA helicase DeaD
- EC
- 3.6.4.13
- Experimental structures
- 6
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 6 · 1 record with a druggable one
Structures
7 records of P0A9P6 in the MolNFT archive: 6 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5B88 | RRM-like domain of DEAD-box protein, CsdA | solution nmr | A | — | 1 (best 0.69) |
| 5B88 | Rrm-like domain of dead-box protein, csda | solution nmr | A | — | — |
| 5GI4 | DEAD-box RNA helicase | x-ray diffraction | A, B | — | 5 (best 0.43) |
| 5GI4 | Dead-box RNA helicase | x-ray diffraction | A, B | — | — |
| 5GJU | DEAD-box RNA helicase | x-ray diffraction | A | AMP | — |
| 5GJU | Dead-box RNA helicase | x-ray diffraction | A | — | — |
| P0A9P6 | AlphaFold monomer V2.0 prediction for ATP-dependent RNA helicase dead (P0A9P6) | predicted | A | — | — |
Ligands
- AMP · Adenosine monophosphate · in 1 record
Experiment against prediction
- 5GJU chain A against the predicted model P0A9P6: TM-score 0.99, RMSD 0.52 Å
- 5GJU chain A against the predicted model P0A9P6: TM-score 0.99, RMSD 0.52 Å
- 5GI4 chain B against the predicted model P0A9P6: TM-score 0.96, RMSD 1.28 Å
- 5GI4 chain B against the predicted model P0A9P6: TM-score 0.96, RMSD 1.28 Å
- 5GI4 chain A against the predicted model P0A9P6: TM-score 0.96, RMSD 1.22 Å
- 5GI4 chain A against the predicted model P0A9P6: TM-score 0.96, RMSD 1.22 Å
- 5B88 chain A against the predicted model P0A9P6: TM-score 0.66, RMSD 3.04 Å
- 5B88 chain A against the predicted model P0A9P6: TM-score 0.66, RMSD 3.04 Å
Elsewhere
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