UniProt P09095
Tyrocidine synthase 1 (P09095)
Tyrocidine synthase 1 (UniProt P09095), EC 5.1.1.11: 6 experimental structures and 1 predicted model on GenesisL1, 6 ligands bound, 43 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P09095
- Protein
- Tyrocidine synthase 1
- EC
- 5.1.1.11
- Experimental structures
- 6
- Predicted models
- 1
- Ligands
- 6
- Pockets
- 43 · 4 records with a druggable one
Structures
7 records of P09095 in the MolNFT archive: 6 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5N81 | Crystal structure of an engineered tyca variant in complex with an O- propargyl-beta-tyr-AMP analog | x-ray diffraction | A, B | 8Q2, SO4 | — |
| 5N82 | Crystal structure of an engineered TycA variant in complex with an beta-Phe-AMP analog | x-ray diffraction | A | SO4, 8PZ | — |
| 5N82 | Crystal structure of an engineered tyca variant in complex with an beta-phe-AMP analog | x-ray diffraction | A | SO4, 8PZ | — |
| 7YWJ | Crystal structure of an engineered TycA variant, TycA pPLA (L313P) | x-ray diffraction | A, B | SO4, CL | 11 (best 0.61) |
| 7YWK | Crystal structure of an engineered TycA variant, TycApPLA, in complex with AMP | x-ray diffraction | A, B | AMP, CL, SO4 | 8 (best 0.69) |
| 9BFE | Tyrocidine synthetase modules 1 and 2 crosslinked in the condensation state, complex B | electron microscopy | A | A1AN1 | 7 (best 0.82) |
| P09095 | AlphaFold monomer V2.0 prediction for tyrocidine synthase 1 (P09095) | predicted | A | — | 17 (best 0.87) |
Ligands
- SO4 · Sulfate ion · in 5 records
- 8PZ · [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl ~{N}-[(3~{S})-3-azanyl-3-phenyl-propanoyl]sulfamate · in 2 records
- CL · Chloride ion · in 2 records
- 8Q2 · [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl ~{N}-[(3~{S})-3-azanyl-3-(4-prop-2-ynoxyphenyl)propanoyl]sulfamate · in 1 record
- A1AN1 · (7S,10aR)-1-methyl-4-{4-[(5R)-1,1,5-trihydroxy-4,4-dimethyl-1,6,11-trioxo-2-oxa-7,10-diaza-1lambda~5~-phosphadodecan-12-yl]phenyl}-3,5,6,7,8,9,10,10a-octahydrocycloocta[d]pyridazin-7-yl [2-({N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl]carbamate · in 1 record
- AMP · Adenosine monophosphate · in 1 record
Experiment against prediction
- 5N81 chain B against the predicted model P09095: TM-score 0.99, RMSD 0.69 Å
- 5N82 chain A against the predicted model P09095: TM-score 0.99, RMSD 0.71 Å
- 5N82 chain A against the predicted model P09095: TM-score 0.99, RMSD 0.71 Å
- 5N81 chain A against the predicted model P09095: TM-score 0.99, RMSD 0.66 Å
- 7YWK chain B against the predicted model P09095: TM-score 0.99, RMSD 0.79 Å
- 7YWK chain A against the predicted model P09095: TM-score 0.99, RMSD 0.99 Å
- 7YWJ chain A against the predicted model P09095: TM-score 0.98, RMSD 1.11 Å
- 7YWJ chain B against the predicted model P09095: TM-score 0.98, RMSD 1.08 Å
- 9BFE chain A against the predicted model P09095: TM-score 0.86, RMSD 2.58 Å
Elsewhere
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