UniProt P08659
Luciferin 4-monooxygenase (P08659)
Luciferin 4-monooxygenase (UniProt P08659), EC 1.13.12.7: 36 experimental structures and 1 predicted model on GenesisL1, 9 ligands bound, 45 pockets. Binding sites, druggability and experiment against prediction (TM-score) in…
- UniProt
- P08659
- Protein
- Luciferin 4-monooxygenase
- EC
- 1.13.12.7
- Experimental structures
- 36
- Predicted models
- 1
- Ligands
- 9
- Pockets
- 45 · 7 records with a druggable one
Structures
37 records of P08659 in the MolNFT archive: 36 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1BA3 | Firefly luciferase in complex with bromoform | x-ray diffraction | A | MBR | 6 (best 0.74) |
| 1BA3 | Firefly luciferase in complex with bromoform | x-ray diffraction | A | — | — |
| 1LCI | Firefly luciferase | x-ray diffraction | A | — | 4 (best 0.70) |
| 1LCI | Firefly luciferase | x-ray diffraction | A | — | — |
| 3IEP | Firefly luciferase apo structure (P41 form) | x-ray diffraction | A | — | — |
| 3IEP | Firefly luciferase apo structure (P41 form) | x-ray diffraction | A | — | — |
| 3IER | Firefly luciferase apo structure (P41 form) with PEG 400 bound | x-ray diffraction | A | — | — |
| 3IER | Firefly luciferase apo structure (P41 form) with peg 400 bound | x-ray diffraction | A | — | — |
| 3IES | Firefly luciferase inhibitor complex | x-ray diffraction | A | — | — |
| 3IES | Firefly luciferase inhibitor complex | x-ray diffraction | A | — | — |
| 3RIX | 1.7A resolution structure of a firefly luciferase-Aspulvi J inhibitor complex | x-ray diffraction | A | — | — |
| 3RIX | 1.7A resolution structure of a firefly luciferase-aspulvinone J inhibitor complex | x-ray diffraction | A | — | — |
| 4E5D | 2.2A resolution structure of a firefly luciferase-benzothiazole inhibitor complex | x-ray diffraction | A | — | — |
| 4E5D | 2.2A resolution structure of a firefly luciferase-benzothiazole inhibitor complex | x-ray diffraction | A | — | — |
| 4G36 | Photinus pyralis luciferase in the adenylate-forming conformation bound to DLSA | x-ray diffraction | A, B | — | — |
| 4G36 | Photinus pyralis luciferase in the adenylate-forming conformation bound to dlsa | x-ray diffraction | A, B | — | — |
| 4G37 | Structure of cross-linked firefly luciferase in second catalytic conformation | x-ray diffraction | A, B | — | — |
| 4G37 | Structure of cross-linked firefly luciferase in second catalytic conformation | x-ray diffraction | A, B | — | — |
| 5DV9 | Crystal structure of the Luciferase | x-ray diffraction | A | — | — |
| 5DV9 | Crystal structure of the luciferase | x-ray diffraction | A | — | — |
| 5DWV | Crystal structure of the Luciferase complexed with substrate analogue | x-ray diffraction | A | 5J4 | 4 (best 0.72) |
| 5DWV | Crystal structure of the luciferase complexed with substrate analogue | x-ray diffraction | A | — | — |
| 5GYZ | luciferase AMP/7-cy-L complex | x-ray diffraction | A | 7BV, AMP | 4 (best 0.70) |
| 5GYZ | Luciferase AMP/7-cy-L complex | x-ray diffraction | A | — | — |
| 5GZ2 | luciferase complex with 7-cy-L | x-ray diffraction | A | 7BV | 3 (best 0.71) |
| 5GZ2 | Luciferase complex with 7-cy-L | x-ray diffraction | A | — | — |
| 5KYT | Structure of Photinus pyralis Luciferase red light emitting variant | x-ray diffraction | A, B | SLU | — |
| 5KYT | Structure of photinus pyralis luciferase red light emitting variant | x-ray diffraction | A, B | SLU | — |
| 5KYV | Structure of Photinus pyralis Luciferase green shifted light emitting variant | x-ray diffraction | A, B | SLU | — |
| 5KYV | Structure of photinus pyralis luciferase green shifted light emitting variant | x-ray diffraction | A, B | SLU | — |
| 5WYS | luciferase with inhibitor 3i | x-ray diffraction | A | 7V6 | — |
| 5WYS | Luciferase with inhibitor 3I | x-ray diffraction | A | 7V6 | — |
| 6HPS | Near-infrared dual bioluminescence imaging in vivo using infra-luciferin | x-ray diffraction | A, B | GKH | — |
| 6HPS | Near-infrared dual bioluminescence imaging in vivo using infra- luciferin | x-ray diffraction | A, B | GKH | — |
| 6Q2M | Crystal structure of Photinus pyralis Luciferase Pps6 mutant in complex with DLSA | x-ray diffraction | A, B, C | SO4, DYD, SLU | 20 (best 0.85) |
| 6Q2M | Crystal structure of photinus pyralis luciferase PPS6 mutant in complex with dlsa | x-ray diffraction | A, B, C | SO4, DYD, SLU | — |
| P08659 | AlphaFold monomer V2.0 prediction for luciferin 4-monooxygenase (P08659) | predicted | A | — | 4 (best 0.81) |
Ligands
- SLU · 5'-O-[N-(dehydroluciferyl)-sulfamoyl] adenosine · in 6 records
- 7BV · (4S)-2-[6-(azepan-1-yl)-1,3-benzothiazol-2-yl]-4,5-dihydro-1,3-thiazole-4-carboxylic acid · in 2 records
- 7V6 · 5-[(3R)-3-(4-boranylphenyl)-3-oxidanyl-propyl]-2-oxidanyl-benzoic acid · in 2 records
- DYD · (2S,5S)-hexane-2,5-diol · in 2 records
- GKH · [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl ~{N}-[[2-[(~{E})-2-(6-oxidanyl-1,3-benzothiazol-2-yl)ethenyl]-1,3-thiazol-4-yl]carbonyl]sulfamate · in 2 records
- SO4 · Sulfate ion · in 2 records
- 5J4 · 2-[6-(cyclobuta-1,3-dien-1-ylamino)-1,3-benzothiazol-2-yl]-1,3-thiazol-4-ol · in 1 record
- AMP · Adenosine monophosphate · in 1 record
- MBR · Tribromomethane · in 1 record
Experiment against prediction
- 6Q2M chain C against the predicted model P08659: TM-score 0.99, RMSD 0.87 Å
- 6Q2M chain C against the predicted model P08659: TM-score 0.99, RMSD 0.87 Å
- 3IES chain A against the predicted model P08659: TM-score 0.99, RMSD 0.89 Å
- 3IES chain A against the predicted model P08659: TM-score 0.99, RMSD 0.89 Å
- 4E5D chain A against the predicted model P08659: TM-score 0.98, RMSD 0.98 Å
- 4E5D chain A against the predicted model P08659: TM-score 0.98, RMSD 0.98 Å
- 6HPS chain A against the predicted model P08659: TM-score 0.98, RMSD 1.07 Å
- 6HPS chain A against the predicted model P08659: TM-score 0.98, RMSD 1.07 Å
- 5GYZ chain A against the predicted model P08659: TM-score 0.98, RMSD 1.00 Å
- 3RIX chain A against the predicted model P08659: TM-score 0.98, RMSD 1.00 Å
Elsewhere
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