UniProt P05546
P05546
P05546 (UniProt P05546): 16 experimental structures and 1 predicted model on GenesisL1. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P05546
- Experimental structures
- 16
- Predicted models
- 1
Structures
17 records of P05546 in the MolNFT archive: 16 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1JMJ | Crystal Structure of Native Heparin Cofactor II | x-ray diffraction | A, B | — | — |
| 1JMJ | Crystal structure of native heparin cofactor II | x-ray diffraction | A, B | — | — |
| 1JMO | Crystal Structure of the Heparin Cofactor II-S195A Thrombin Complex | x-ray diffraction | A | — | — |
| 1JMO | Crystal structure of the heparin cofactor II-S195A thrombin complex | x-ray diffraction | A | — | — |
| 2NAT | Structural insights into interaction of KYE28 and lipopolysachharide | solution nmr | A | — | — |
| 2NAT | Structural insights into interaction of KYE28 and lipopolysachharide | solution nmr | A | — | — |
| 2NCU | NMR structure of KYE21 in LPS micelles | solution nmr | A | — | — |
| 2NCU | NMR structure of KYE21 in lps micelles | solution nmr | A | — | — |
| 2NCV | NMR structure of RWS21 structure in LPS micelles | solution nmr | A | — | — |
| 2NCV | NMR structure of RWS21 structure in lps micelles | solution nmr | A | — | — |
| 2NCW | NMR structure of WWWKYE21 structure in LPS micelles | solution nmr | A | — | — |
| 2NCW | NMR structure of WWWKYE21 structure in lps micelles | solution nmr | A | — | — |
| 6J12 | Three-dimensional Solution NMR Structure of KYE28-PEG48 in Microgel | solution nmr | A | — | — |
| 6J12 | Three-dimensional solution NMR structure of KYE28-PEG48 in microgel | solution nmr | A | — | — |
| 6KBO | Three-dimensional lps bound structure of VG16KRKP-KYE28. | solution nmr | B | — | — |
| 6KBV | Three-dimensional cytoplasmic membrane-bound structure of VG16KRKP- KYE28 | solution nmr | B | — | — |
| P05546 | AlphaFold monomer V2.0 prediction for heparin cofactor 2 (P05546) | predicted | A | — | — |
Experiment against prediction
- 1JMJ chain B against the predicted model P05546: TM-score 0.96, RMSD 1.59 Å
- 1JMJ chain B against the predicted model P05546: TM-score 0.96, RMSD 1.59 Å
- 1JMJ chain A against the predicted model P05546: TM-score 0.93, RMSD 1.58 Å
- 1JMJ chain A against the predicted model P05546: TM-score 0.93, RMSD 1.58 Å
- 1JMO chain A against the predicted model P05546: TM-score 0.89, RMSD 1.49 Å
- 1JMO chain A against the predicted model P05546: TM-score 0.89, RMSD 1.49 Å
- 6KBO chain B against the predicted model P05546: TM-score 0.33, RMSD 2.58 Å
- 6KBV chain B against the predicted model P05546: TM-score 0.33, RMSD 2.11 Å
- 6J12 chain A against the predicted model P05546: TM-score 0.31, RMSD 2.16 Å
- 6J12 chain A against the predicted model P05546: TM-score 0.31, RMSD 2.16 Å
Elsewhere
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