MolNFT v1 · #154463 · protein
Three-dimensional cytoplasmic membrane-bound structure of VG16KRKP- KYE28
6KBV: “Three-dimensional cytoplasmic membrane-bound structure of VG16KRKP- KYE28”. Solution nmr. MolNFT v1 #154463 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6KBV
- Type
- protein
- Length
- 44 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- VG16KRKP; Heparin cofactor 2
- UniProt
- P05546
Structure
solution nmr · 2 distinct chains · 39% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | VG16KRKP | protein | 16 | 38% helix, 0% strand | — |
| B | Heparin cofactor 2 | protein | 28 | 39% helix, 0% strand | P05546 |
Interfaces
1 interface between chains.
- A–B · 523 Ų buried · 0 hydrogen bonds · protein-protein
Compared structures
- 6KBV · Three-dimensional cytoplasmic membrane-bound structure of VG16KRKP-KYE28 · the same entry in another collection · chain A against A, TM-score 1.00
- P05546 · AlphaFold monomer V2.0 prediction for heparin cofactor 2 (P05546) · a predicted model of the same protein · chain B against A, TM-score 0.33
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P05546
- Elsewhere: RCSB PDB 6KBV · PDBe 6KBV · UniProt P05546
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