UniProt G7JT50
Porphyromonas-type peptidyl-arginine deiminase (G7JT50)
Porphyromonas-type peptidyl-arginine deiminase (UniProt G7JT50), EC 3.5.3.12: 4 experimental structures and 1 predicted model on GenesisL1, 2 ligands bound, 1 pocket. Binding sites, druggability and experiment against prediction…
- UniProt
- G7JT50
- Protein
- Porphyromonas-type peptidyl-arginine deiminase
- EC
- 3.5.3.12
- Experimental structures
- 4
- Predicted models
- 1
- Ligands
- 2
- Pockets
- 1 · 1 record with a druggable one
Structures
5 records of G7JT50 in the MolNFT archive: 4 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 6NIB | Crystal Structure of Medicago truncatula Agmatine Iminohydrolase (Deiminase) | x-ray diffraction | A | NA | 1 (best 0.59) |
| 6NIB | Crystal structure of medicago truncatula agmatine iminohydrolase (deiminase) | x-ray diffraction | A | NA | — |
| 6NIC | Crystal Structure of Medicago truncatula Agmatine Iminohydrolase (Deiminase) in Complex with… | x-ray diffraction | A, B, C, D | KQY, NA | — |
| 6NIC | Crystal structure of medicago truncatula agmatine iminohydrolase (deiminase) in complex with… | x-ray diffraction | A, B, C, D | KQY, NA | — |
| G7JT50 | AlphaFold monomer V2.0 prediction for agmatine deiminase (G7JT50) | predicted | A | — | — |
Ligands
Experiment against prediction
- 6NIC chain B against the predicted model G7JT50: TM-score 1.00, RMSD 0.47 Å
- 6NIC chain B against the predicted model G7JT50: TM-score 1.00, RMSD 0.47 Å
- 6NIC chain A against the predicted model G7JT50: TM-score 1.00, RMSD 0.48 Å
- 6NIC chain A against the predicted model G7JT50: TM-score 1.00, RMSD 0.48 Å
- 6NIB chain A against the predicted model G7JT50: TM-score 0.99, RMSD 0.50 Å
- 6NIB chain A against the predicted model G7JT50: TM-score 0.99, RMSD 0.50 Å
- 6NIC chain C against the predicted model G7JT50: TM-score 0.99, RMSD 0.53 Å
- 6NIC chain C against the predicted model G7JT50: TM-score 0.99, RMSD 0.53 Å
- 6NIC chain D against the predicted model G7JT50: TM-score 0.99, RMSD 0.63 Å
- 6NIC chain D against the predicted model G7JT50: TM-score 0.99, RMSD 0.63 Å
Elsewhere
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