UniProt B0C1V6
Photosystem II D2 protein 1 (B0C1V6)
Photosystem II D2 protein 1 (UniProt B0C1V6), EC 1.10.3.9: 2 experimental structures and 1 predicted model on GenesisL1, 9 ligands bound, 15 pockets. Binding sites, druggability and experiment against prediction (TM-score) in…
- UniProt
- B0C1V6
- Protein
- Photosystem II D2 protein 1
- EC
- 1.10.3.9
- Experimental structures
- 2
- Predicted models
- 1
- Ligands
- 9
- Pockets
- 15 · 2 records with a druggable one
Structures
3 records of B0C1V6 in the MolNFT archive: 2 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 7YMI | PSII-Pcb Dimer of Acaryochloris Marina | electron microscopy | D, d | CL7, PHO, LHG, LMG, DGD, FE2 | — |
| 7YMM | PSII-Pcb Tetramer of Acaryochloris Marina | electron microscopy | 1D, 2D, 3D, 4D | CL7, PHO, LHG, LMG, DGD, FE2 | 11 (best 0.84) |
| B0C1V6 | AlphaFold monomer V2.0 prediction for photosystem II D2 protein 1 (B0C1V6) | predicted | A | — | 4 (best 0.59) |
Ligands
- 8CT · (6'R,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta,beta-carotene · in 2 records
- BCT · Bicarbonate ion · in 2 records
- CL7 · Chlorophyll D · in 2 records
- DGD · Digalactosyl diacyl glycerol (dgdg) · in 2 records
- FE2 · Fe (II) ion · in 2 records
- LHG · 1,2-dipalmitoyl-phosphatidyl-glycerole · in 2 records
- LMG · 1,2-distearoyl-monogalactosyl-diglyceride · in 2 records
- PHO · Pheophytin A · in 2 records
- PL9 · 2,3-dimethyl-5-(3,7,11,15,19,23,27,31,35-nonamethyl-2, 6,10,14,18,22,26,30,34-hexatriacontanonaenyl-2,5-cyclohexadiene-1,4-dione-2,3-dimethyl-5-solanesyl-1,4-benzoquinone · in 2 records
Experiment against prediction
- 7YMI chain D against the predicted model B0C1V6: TM-score 0.99, RMSD 0.55 Å
- 7YMM chain 1D against the predicted model B0C1V6: TM-score 0.99, RMSD 0.55 Å
Elsewhere
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