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Ligand · CL7

CL7 · Chlorophyll D

CL7, Chlorophyll D (C54 H70 Mg N4 O6, 895.5 g/mol), in the MolNFT structures on GenesisL1: bound in 7 records (5 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
CL7
Formula
C54 H70 Mg N4 O6
Class
ligand
Structures
7
PDB entries
5

Binding sites

CL7 in 7 structures; the first of them:

  • 7DWQ · Photosystem I from a chlorophyll d-containing cyanobacterium Acaryochloris marina · CL7 A1022 · binds PHE453, ILE457, ASP460, PHE542, PHE598, TRP599, TYR601, ASN602 and 12 more

Residues it binds most

LEU 707, PHE 627, HIS 601, ILE 546, VAL 437, TRP 473, ALA 440, TYR 372, GLY 387, MET 357 (residue and the binding sites it lines).

Found with

  • LHG · 1,2-dipalmitoyl-phosphatidyl-glycerole
  • LMG · 1,2-distearoyl-monogalactosyl-diglyceride
  • PHO · Pheophytin A
  • DGD · Digalactosyl diacyl glycerol (dgdg)
  • HEM · Protoporphyrin IX containing Fe
  • PL9 · 2,3-dimethyl-5-(3,7,11,15,19,23,27,31,35-nonamethyl-2, 6,10,14,18,22,26,30,34-hexatriacontanonaenyl-2,5-cyclohexadiene-1,4-dione-2,3-dimethyl-5-solanesyl-1,4-benzoquinone
  • FE2 · Fe (II) ion
  • 8CT · (6'R,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta,beta-carotene
  • BCR · Beta-carotene
  • BCT · Bicarbonate ion
  • CLA · Chlorophyll A
  • F6C · Chlorophyll F

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