UniProt A5F5X0
Na(+)-translocating NADH-quinone reductase subunit B (A5F5X0)
Na(+)-translocating NADH-quinone reductase subunit B (UniProt A5F5X0), EC 7.2.1.1: 10 experimental structures and 1 predicted model on GenesisL1, 5 ligands bound, 42 pockets. Binding sites, druggability and experiment against…
- UniProt
- A5F5X0
- Protein
- Na(+)-translocating NADH-quinone reductase subunit B
- EC
- 7.2.1.1
- Experimental structures
- 10
- Predicted models
- 1
- Ligands
- 5
- Pockets
- 42 · 4 records with a druggable one
Structures
11 records of A5F5X0 in the MolNFT archive: 10 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 7XK3 | Cryo-EM structure of Na+-pumping NADH-ubiqui oxidoreductase from Vibrio cholerae, state 1 | electron microscopy | B | FMN, RBF, PEE | 12 (best 0.84) |
| 7XK3 | Cryo-EM structure of na+-pumping NADH-ubiquinone oxidoreductase from vibrio cholerae, state 1 | electron microscopy | B | FMN, RBF, PEE | — |
| 7XK4 | Cryo-EM structure of Na+-pumping NADH-ubiqui oxidoreductase from Vibrio cholerae, state 2 | electron microscopy | B | FMN, RBF, PEE | 12 (best 0.84) |
| 7XK4 | Cryo-EM structure of na+-pumping NADH-ubiquinone oxidoreductase from vibrio cholerae, state 2 | electron microscopy | B | FMN, RBF, PEE | — |
| 7XK5 | Cryo-EM structure of Na+-pumping NADH-ubiqui oxidoreductase from Vibrio cholerae, state 3 | electron microscopy | B | FMN, RBF, PEE | — |
| 7XK5 | Cryo-EM structure of na+-pumping NADH-ubiquinone oxidoreductase from vibrio cholerae, state 3 | electron microscopy | B | FMN, RBF, PEE | — |
| 7XK6 | Cryo-EM structure of Na+-pumping NADH-ubiqui oxidoreductase from Vibrio cholerae, with aurachin D-42 | electron microscopy | B | FMN, RBF, 0NI, PEE | 11 (best 0.84) |
| 7XK6 | Cryo-EM structure of na+-pumping NADH-ubiquinone oxidoreductase from vibrio cholerae, with aurachin… | electron microscopy | B | FMN, RBF, 0NI, PEE | — |
| 7XK7 | Cryo-EM structure of Na+-pumping NADH-ubiqui oxidoreductase from Vibrio cholerae, with korormicin | electron microscopy | B | FMN, RBF, IQT, PEE | — |
| 7XK7 | Cryo-EM structure of na+-pumping NADH-ubiquinone oxidoreductase from vibrio cholerae, with… | electron microscopy | B | FMN, RBF, IQT, PEE | — |
| A5F5X0 | AlphaFold monomer V2.0 prediction for na(+)-translocating NADH- quinone reductase subunit B (A5F5X0) | predicted | A | — | 7 (best 0.70) |
Ligands
Experiment against prediction
- 7XK3 chain B against the predicted model A5F5X0: TM-score 0.98, RMSD 1.29 Å
- 7XK3 chain B against the predicted model A5F5X0: TM-score 0.98, RMSD 1.29 Å
- 7XK5 chain B against the predicted model A5F5X0: TM-score 0.98, RMSD 1.30 Å
- 7XK5 chain B against the predicted model A5F5X0: TM-score 0.98, RMSD 1.30 Å
- 7XK4 chain B against the predicted model A5F5X0: TM-score 0.97, RMSD 1.31 Å
- 7XK4 chain B against the predicted model A5F5X0: TM-score 0.97, RMSD 1.31 Å
- 7XK6 chain B against the predicted model A5F5X0: TM-score 0.97, RMSD 1.36 Å
- 7XK6 chain B against the predicted model A5F5X0: TM-score 0.97, RMSD 1.36 Å
- 7XK7 chain B against the predicted model A5F5X0: TM-score 0.97, RMSD 1.43 Å
- 7XK7 chain B against the predicted model A5F5X0: TM-score 0.97, RMSD 1.43 Å
Elsewhere
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