UniProt A3KPE8
Small RNA degrading nuclease 1 (A3KPE8)
Small RNA degrading nuclease 1 (UniProt A3KPE8), EC 3.1.-.-: 4 experimental structures and 1 predicted model on GenesisL1, 2 ligands bound, 4 pockets. Binding sites, druggability and experiment against prediction (TM-score) in…
- UniProt
- A3KPE8
- Protein
- Small RNA degrading nuclease 1
- EC
- 3.1.-.-
- Experimental structures
- 4
- Predicted models
- 1
- Ligands
- 2
- Pockets
- 4 · 1 record with a druggable one
Structures
5 records of A3KPE8 in the MolNFT archive: 4 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5Z9X | Arabidopsis SMALL RNA DEGRADING NUCLEASE 1 in complex with an RNA substrate | x-ray diffraction | A | SO4, MG | — |
| 5Z9X | Arabidopsis small RNA degrading nuclease 1 in complex with an RNA substrate | x-ray diffraction | A | SO4, MG | — |
| 5Z9Z | The C-terminal RRM domain of Arabidopsis SMALL RNA DEGRADING NUCLEASE 1 (E329A/E330A/E332A) | x-ray diffraction | A | — | — |
| 5Z9Z | The C-terminal rrm domain of arabidopsis small RNA degrading nuclease 1 (E329A/E330A/E332A) | x-ray diffraction | A | — | — |
| A3KPE8 | AlphaFold monomer V2.0 prediction for small RNA degrading nuclease 1 (A3KPE8) | predicted | A | — | 4 (best 0.53) |
Ligands
Experiment against prediction
- 5Z9X chain A against the predicted model A3KPE8: TM-score 0.97, RMSD 1.14 Å
- 5Z9X chain A against the predicted model A3KPE8: TM-score 0.97, RMSD 1.14 Å
- 5Z9Z chain A against the predicted model A3KPE8: TM-score 0.91, RMSD 1.37 Å
- 5Z9Z chain A against the predicted model A3KPE8: TM-score 0.91, RMSD 1.37 Å
Elsewhere
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