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Ligand · Z8A

Z8A · N-[(2S,3S,4R)-1,3,4-trihydroxyoctadecan-2-yl]hexacosanamide

Z8A, N-[(2S,3S,4R)-1,3,4-trihydroxyoctadecan-2-yl]hexacosanamide (C44 H89 N O4, 696.2 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it…

Component
Z8A
Formula
C44 H89 N O4
Class
ligand
Structures
3
PDB entries
3

Binding sites

Z8A in 3 structures; the first of them:

  • 8C80 · Cryo-EM structure of the yeast SPT-Orm1-Monomer complex · Z8A A302 · binds ASN76, TRP79, HIS89, ILE92, MET117, THR118, TYR119, ILE121 and 14 more
  • 8C81 · Cryo-EM structure of the yeast SPT-Orm1-Sac1 complex · Z8A A302 · binds ASN76, TRP79, ILE88, HIS89, ILE92, LEU96, LEU114, MET117 and 17 more
  • 8C82 · Cryo-EM structure of the yeast SPT-Orm1-Dimer complex · Z8A A301 · binds MET75, ASN76, TRP79, ILE88, HIS89, ILE92, TYR100, LEU114 and 16 more

Residues it binds most

ILE 4, TYR 4, MET 4, LEU 4, HIS 4, ASN 4, GLY 4, PRO 4, THR 4, TRP 4 (residue and the binding sites it lines).

Found with

  • PLP · Pyridoxal-5'-phosphate
  • Q7G · 2-{[(4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranosyl)oxy]methyl}-4-{[(3beta,9beta,14beta, 17beta,25r)-spirost-5-en-3-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranoside
  • ERG · Ergosterol

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