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Ligand · YG9

YG9 · (5R)-5-[2-(4-methoxyphenyl)ethyl]-5-methylimidazolidine-2,4-dione

YG9, (5R)-5-[2-(4-methoxyphenyl)ethyl]-5-methylimidazolidine-2,4-dione (C13 H16 N2 O3, 248.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues…

Component
YG9
Formula
C13 H16 N2 O3
Class
ligand
Structures
2
PDB entries
2

Binding sites

YG9 in 2 structures; the first of them:

  • 7FSG · SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with… · YG9 D501 · binds GLN244, LEU249, GLN253, ASP256, ILE257, THR260, HIS293
  • 8V7R · PanDDA analysis -- Crystal Structure of Zika virus NS3 Helicase in complex with Z56772132 · YG9 A703 · binds PRO292, LYS389, HIS486, ASP540, LEU541, PRO542, ARG598, VAL599 and 4 more

Residues it binds most

THR 3, ARG 2, HIS 4, ASP 3, GLN 2, ALA 2, ILE 2, LEU 2, MET 2, PRO 1 (residue and the binding sites it lines).

Found with

  • EDO · 1,2-ethanediol
  • ALA · Alanine
  • DGL · D-glutamic acid
  • GLY · Glycine
  • PO4 · Phosphate ion
  • SO4 · Sulfate ion
  • DMS · Dimethyl sulfoxide

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