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Ligand · XOG

XOG · (2E,6E)-2,6-dimethylocta-2,6-dienedial

XOG, (2E,6E)-2,6-dimethylocta-2,6-dienedial (C10 H14 O2, 166.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
XOG
Formula
C10 H14 O2
Class
ligand
Structures
2
PDB entries
2

Binding sites

XOG in 2 structures; the first of them:

  • 5COB · Crystal structure of iridoid synthase in complex with NADP+ and 8-oxogeranial at… · XOG A1002 · binds GLY144, ILE145, LYS146, PHE149, TYR178, MET213, PHE342, ILE345 and 3 more
  • 5MLH · Plantago major multifunctional oxidoreductase in complex with 8- oxogeranial and NADP+ · XOG A402 · binds LYS147, PHE153, ILE156, ASN205, MET215, VAL347, ILE350, PRO351 and 1 more

Residues it binds most

ILE 5, PHE 5, LEU 4, LYS 5, MET 5, ALA 4, GLY 4, SER 4, TYR 4, ASN 1 (residue and the binding sites it lines).

Found with

  • NAP · Nadp nicotinamide-adenine-dinucleotide phosphate
  • CA · Calcium ion
  • NA · Sodium ion
  • GOL · Glycerol
  • PG4 · Tetraethylene glycol

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