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Ligand · XOB

XOB · 1-[[(3~{R})-2,3-dihydro-1,4-benzodioxin-3-yl]methyl]-3-oxidanyl-thieno[3,2-d]pyrimidine-2,4-dione

XOB, 1-[[(3~{R})-2,3-dihydro-1,4-benzodioxin-3-yl]methyl]-3-oxidanyl-thieno[3,2-d]pyrimidine-2,4-dione (C15 H12 N2 O5 S, 332.3 g/mol), in the MolNFT structures on GenesisL1: bound in 1 record (1 PDB entry). Every binding site with its…

Component
XOB
Formula
C15 H12 N2 O5 S
Class
ligand
Structures
1
PDB entries
1

Binding sites

XOB in 1 structure; the first of them:

  • 8CG9 · Crystal structure of human DNA cross-link repair 1A in complex with a cyclic… · XOB A1102 · binds ASP736, HIS737, ASP815, THR840, TYR841, GLY963, TRP964, HIS994

Residues it binds most

ASP 1, HIS 1, GLY 1, THR 1, TRP 1, TYR 1 (residue and the binding sites it lines).

Found with

  • R3Z · 1-[(2S)-2,3-dihydro-1,4-benzodioxin-2-ylmethyl]-3-hydroxythieno[3,2-d]pyrimidine-2,4(1H,3H)-dione
  • NI · Nickel (II) ion
  • ZN · Zinc ion
  • SO4 · Sulfate ion

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