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Ligand · XGP

XGP · 1-O-phosphono-beta-D-glucopyranose

XGP, 1-O-phosphono-beta-D-glucopyranose (C6 H13 O9 P, 260.1 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
XGP
Formula
C6 H13 O9 P
Class
sugar
Structures
4
PDB entries
2

Binding sites

XGP in 4 structures; the first of them:

  • 5O6R · Structure of beta-phosphoglucomutase D10N mutant in complex with glucose-1-phosphate and… · XGP A302 · binds ASN10, HIS20, TRP24, LEU44, GLY46, VAL47, ARG49, SER52 and 4 more
  • 6HDG · D170N variant of beta-phosphoglucomutase from Lactococcus lactis complexed with beta-G1P… · XGP A301 · binds ASP10, HIS20, TRP24, LEU44, LYS45, GLY46, VAL47, ARG49 and 6 more
  • 5O6R · Structure of beta-phosphoglucomutase D10N mutant in complex with glucose-1-phosphate and… · XGP A302 · binds ASN10, HIS20, TRP24, LEU44, GLY46, VAL47, ARG49, SER52 and 4 more
  • 6HDG · D170N variant of beta-phosphoglucomutase from lactococcus lactis complexed with beta-G1P… · XGP A301 · binds ASP10, HIS20, TRP24, LEU44, LYS45, GLY46, VAL47, ARG49 and 6 more

Residues it binds most

LYS 4, SER 4, ASN 4, ARG 4, GLY 4, HIS 4, LEU 4, TRP 4, VAL 4, ASP 2 (residue and the binding sites it lines).

Found with

  • ALF · Tetrafluoroaluminate ion
  • MG · Magnesium ion
  • NA · Sodium ion
  • EDO · 1,2-ethanediol

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