GL1X · GenesisL1 explorer

Ligand · XAX

XAX · {[(5aR,8R,9aR)-2-amino-4-oxo-6,7-di(sulfanyl-kappaS)-3,5,5a,8,9a,10-hexahydro-4H-pyrano[3,2-g]pteridin-8-yl]methyl dihydrogenato(2-) phosphate}(hydroxy)oxo(thioxo)molybdenum

XAX, {[(5aR,8R,9aR)-2-amino-4-oxo-6,7-di(sulfanyl-kappaS)-3,5,5a,8,9a,10-hexahydro-4H-pyrano[3,2-g]pteridin-8-yl]methyl dihydrogenato(2-) phosphate}(hydroxy)oxo(thioxo)molybdenum (C10 H13 Mo N5 O8 P S3, 554.4 g/mol), in the MolNFT…

Component
XAX
Formula
C10 H13 Mo N5 O8 P S3
Class
ligand
Structures
8
PDB entries
4

Binding sites

XAX in 8 structures; the first of them:

  • 2W54 · Crystal Structure of Xanthine Dehydrogenase from Rhodobacter capsulatus in Complex with… · XAX B1778 · binds GLN102, CYS103, CYS136, GLN197, GLY226, GLY227, PHE228, GLY229 and 20 more
  • 2W55 · Crystal Structure of Xanthine Dehydrogenase (E232Q variant) from Rhodobacter capsulatus… · XAX B1778 · binds GLN102, CYS103, CYS136, GLN197, GLY226, GLY227, PHE228, GLY229 and 20 more
  • 3AX7 · Bovine Xanthine Oxidase, protease cleaved form · XAX A3003 · binds GLN112, CYS113, CYS150, GLN767, GLY796, GLY797, PHE798, GLY799 and 20 more
  • 3AX9 · Bovine xanthine oxidase, protease cleaved form · XAX A3003 · binds GLN112, CYS113, CYS150, GLN767, GLY796, GLY797, PHE798, GLY799 and 20 more
  • 2W54 · Crystal structure of xanthine dehydrogenase from rhodobacter capsulatus in complex with… · XAX B1778 · binds GLN102, CYS103, CYS136, GLN197, GLY226, GLY227, PHE228, GLY229 and 20 more
  • 2W55 · Crystal structure of xanthine dehydrogenase (E232Q variant) from rhodobacter capsulatus… · XAX B1778 · binds GLN102, CYS103, CYS136, GLN197, GLY226, GLY227, PHE228, GLY229 and 20 more
  • 3AX7 · Bovine xanthine oxidase, protease cleaved form · XAX A3003 · binds GLN112, CYS113, CYS150, GLN767, GLY796, GLY797, PHE798, GLY799 and 20 more
  • 3AX9 · Bovine xanthine oxidase, protease cleaved form · XAX A3003 · binds GLN112, CYS113, CYS150, GLN767, GLY796, GLY797, PHE798, GLY799 and 20 more

Residues it binds most

GLY 24, GLN 24, ALA 24, PHE 24, SER 24, CYS 24, GLU 24, THR 24, ARG 24, LEU 24 (residue and the binding sites it lines).

Found with

  • FAD · Flavin-adenine dinucleotide
  • FES · Fe2/s2 (inorganic) cluster
  • BCT · Bicarbonate ion
  • SAL · 2-hydroxybenzoic acid
  • BA · Barium ion
  • CA · Calcium ion
  • GOL · Glycerol
  • HHR · 6-hydroxymethylpterin
  • HPA · Hypoxanthine

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