Ligand · UQ0
UQ0 · 2,3-dimethoxy-5-methyl-1,4-benzoquinone
UQ0, 2,3-dimethoxy-5-methyl-1,4-benzoquinone (C9 H10 O4, 182.2 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (4 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…
- Component
- UQ0
- Formula
- C9 H10 O4
- Class
- ligand
- Structures
- 4
- PDB entries
- 4
Binding sites
UQ0 in 4 structures; the first of them:
- 8BEO · Crystal structure of E. coli glyoxylate carboligase mutant I393A with MAP · UQ0 A606 · binds GLU249, GLN353, LYS356, ARG357, CYS588
- 8I01 · Crystal structure of Escherichia coli glyoxylate carboligase · UQ0 A705 · binds GLU249, GLN353, LYS356, ARG357, CYS588
- 8I05 · Crystal structure of Escherichia coli glyoxylate carboligase double mutant · UQ0 A705 · binds GLU249, GLN353, LYS356, ARG357, CYS588
- 8I08 · Crystal structure of Escherichia coli glyoxylate carboligase quadruple mutant · UQ0 A705 · binds GLU249, GLN353, LYS356, ARG357, CYS588
Residues it binds most
GLN 42, CYS 42, ARG 24, GLU 24, LYS 17, HIS 12, LEU 12, PHE 12, VAL 10, TYR 8 (residue and the binding sites it lines).
Found with
- FAD · Flavin-adenine dinucleotide
- MG · Magnesium ion
- TPP · Thiamine diphosphate
- ALU · Methyl hydrogen (S)-acetylphosphonate
- TDK · 3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-2-{(1S)-1-hydroxy-1-[(R)-hydroxy(methoxy)phosphoryl]ethyl}-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-3-ium
- NA · Sodium ion
- CL · Chloride ion
- DTT · 2,3-dihydroxy-1,4-dithiobutane
- DTU · (2R,3S)-1,4-dimercaptobutane-2,3-diol
- FMT · Formic acid
- PEG · Di(hydroxyethyl)ether
- PGE · Triethylene glycol
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