Ligand · SOR
SOR · sorbitol
SOR, sorbitol (C6 H14 O6, 182.2 g/mol), in the MolNFT structures on GenesisL1: bound in 19 records (12 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.
- Component
- SOR
- Formula
- C6 H14 O6
- Class
- ligand
- Structures
- 19
- PDB entries
- 12
Binding sites
SOR in 19 structures; the first of them:
- 5JO9 · Structural characterization of the thermostable Bradyrhizobium japonicum d-sorbitol… · SOR A302 · binds TYR92, SER140, LEU141, ALA142, THR147, GLU150, TYR153, PRO183 and 6 more
- 5K4P · Catalytic Domain of MCR-1 phosphoethanolamine transferase · SOR A611 · binds GLY282, THR283, SER284, TYR287, GLY479, MET480, PRO481, ASN482
- 5M6G · Crystal structure Glucan 1,4-beta-glucosidase from Saccharopolyspora erythraea · SOR A711 · binds LEU89, GLY91, GLY92, ASP129, PHE178, ARG192, LYS231, HIS232 and 6 more
- 5NHA · Crystal structure of xylose isomerase from Piromyces sp. E2 in complex with two Mn2+ ions… · SOR A503 · binds TRP50, HIS102, TRP140, TRP189, GLU233, GLU269, HIS272, ASP297 and 1 more
- 5XIM · Protein engineering of xylose (glucose) isomerase from actinoplanes missouriensis. 1.… · SOR A397 · binds TRP16, HIS54, THR90, PHE94, VAL135, TRP137, GLU181, LYS183 and 6 more
- 6BJD · Crystal Structure of Human Calpain-3 Protease Core in Complex with E-64 · SOR B505 · binds TYR170, GLU229, PHE238
- 6FK2 · Galectin-3 carbohydrate recognition domain in complex with lactitol · SOR B1 · binds ARG162, GLU165, GLU184, ARG186
- 6X39 · Crystal structure of the FN5 domain of Mouse Lar · SOR A901 · binds ARG750, LEU751, GLU752, ASN753, GLU781, THR782, THR783, THR806
- 7WY1 · Structure of the Oxomolybdenum Mesoporphyrin IX-Reconstituted CYP102A1 Haem Domain with… · SOR B504 · binds GLN387, HIS388, PHE390, LYS391, PHE393, GLY394, ASN395, GLY396 and 2 more
- 7YW2 · Crystal structure of tRNA 2'-phosphotransferase from Mus musculus · SOR A313 · binds HIS36, LYS40, SER102, GLY144, ARG145
- 8H1N · Crystal structure of glucose-2-epimerase mutant_D254A in complex with D-Glucitol from… · SOR A501 · binds ARG60, TYR119, ASP187, MET190, HIS191, TRP251, GLY252, HIS273 and 7 more
- 5K4P · Catalytic domain of mcr-1 phosphoethanolamine transferase · SOR A611 · binds GLY282, THR283, SER284, TYR287, GLY479, MET480, PRO481, ASN482
- 5M6G · Crystal structure glucan 1,4-beta-glucosidase from saccharopolyspora erythraea · SOR A711 · binds LEU89, GLY91, GLY92, ASP129, PHE178, ARG192, LYS231, HIS232 and 6 more
- 5NHA · Crystal structure of xylose isomerase from piromyces sp. E2 in complex with two MN2+ ions… · SOR A503 · binds TRP50, HIS102, TRP140, TRP189, GLU233, GLU269, HIS272, ASP297 and 1 more
- 5XIM · Protein engineering of xylose (glucose) isomerase from actinoplanes missouriensis. 1.… · SOR A397 · binds TRP16, HIS54, THR90, PHE94, VAL135, TRP137, GLU181, LYS183 and 6 more
- 6BJD · Crystal structure of human calpain-3 protease core in complex with E- 64 · SOR B505 · binds GLU229
- 6FK2 · Galectin-3 carbohydrate recognition domain in complex with lactitol · SOR B1 · binds ARG162, GLU184, ARG186
- 6PEJ · Structure of sorbitol dehydrogenase from sinorhizobium meliloti 1021 bound to sorbitol · SOR A301 · binds PHE91, GLN141, ALA142, ARG145, GLU147, TYR153, GLY184, VAL185 and 4 more
- 6X39 · Crystal structure of the FN5 domain of mouse lar · SOR A901 · binds ARG750, LEU751, GLU752, ASN753, GLU781, THR782, THR783
Residues it binds most
GLU 31, TRP 24, ASP 19, HIS 25, PHE 21, VAL 14, GLY 12, THR 14, ARG 13, LYS 14 (residue and the binding sites it lines).
Found with
- MG · Magnesium ion
- GOL · Glycerol
- E64 · N-[N-[1-hydroxycarboxyethyl-carbonyl]leucylamino-butyl]-guanidine
- CA · Calcium ion
- MN · Manganese (II) ion
- ZN · Zinc ion
- GAL · beta-D-galactopyranose
- CL · Chloride ion
- PO4 · Phosphate ion
- SO4 · Sulfate ion
- PGE · Triethylene glycol
- D0L · (2S)-2-[[(2S)-1-heptylpyrrolidin-2-yl]carbonylamino]-3-phenyl-propanoic acid
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