Ligand · RDZ
RDZ · Geranyl phosphate
RDZ, Geranyl phosphate (C10 H19 O4 P, 234.2 g/mol), in the MolNFT structures on GenesisL1: bound in 5 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.
- Component
- RDZ
- Formula
- C10 H19 O4 P
- Class
- ligand
- Structures
- 5
- PDB entries
- 3
Binding sites
RDZ in 5 structures; the first of them:
- 7AG5 · Structure of the Laspartomycin C double mutant G4D D-allo-Thr9D-Dap in complex with… · RDZ A103 · binds ASP1, DNP2, GLY6, ASP7, GLY8, ILE10, PRO11
- 7ANY · Structure of the Laspartomycin C Friulimicin-like mutant in complex with Geranyl phosphate · RDZ A103 · binds 9GE0, ASN1, DNP2, GLY6, ASP7, GLY8, VAL10, PRO11 and 3 more
- 7R0D · Structure of NUDT15 in complex with Geranyl monophosphate · RDZ AAA201 · binds GLY15, VAL16, GLY17, LEU45, PRO46, GLY47, GLY48, HIS49 and 8 more
- 7AG5 · Structure of the laspartomycin C double mutant G4D D-allo-THR9D-dap in complex with… · RDZ A103 · binds ASP1, DNP2, GLY6, ASP7, GLY8, ILE10, PRO11
- 7ANY · Structure of the laspartomycin C friulimicin-like mutant in complex with geranyl phosphate · RDZ A103 · binds ASN1, DNP2, GLY6, ASP7, GLY8, VAL10, PRO11, DNP2 and 2 more
Residues it binds most
GLY 28, PRO 28, DNP 26, ASP 26, VAL 26, ASN 24, 9GE 12, LEU 2, TYR 2, GLU 2 (residue and the binding sites it lines).
Found with
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