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Ligand · P4K

P4K · polyethylene glycol

P4K, polyethylene glycol (C30 H62 O15, 662.8 g/mol), in the MolNFT structures on GenesisL1: bound in 11 records (8 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
P4K
Formula
C30 H62 O15
Class
ligand
Structures
11
PDB entries
8

Binding sites

P4K in 11 structures; the first of them:

  • 6ON4 · Crystal structure of the GntR-type sialoregulator NanR from Escherichia coli, in complex… · P4K B301 · binds ILE104, LEU107, ALA111, LEU115, PHE124, LEU127, PHE131, ILE191 and 10 more
  • 6RFX · Crystal structure of Eis2 from Mycobacterium abscessus · P4K D502 · binds MSE19, ALA22, TYR23, PHE26, ARG28, PHE411
  • 6SCZ · Mycobacterium tuberculosis alanine racemase inhibited by DCS · P4K A423 · binds PRO181, ASP182, MET219, ALA220, ARG221, PRO222
  • 8QJ5 · Crystal structure of the Levansucrase beta from Pseudomonas syringae pv. actinidiae · P4K A502 · binds PRO142, THR143, CYS166, PRO169, GLY170, ALA171, ALA172, LYS197 and 3 more
  • 5VI0 · Pseudomonas fluorescens alkylpurine DNA glycosylase alkc bound to DNA containing an… · P4K A401 · binds SER85, GLY86, PHE87, LEU90, THR116, PHE117, GLU148, HIS149 and 8 more
  • 6ON4 · Crystal structure of the gntr-type sialoregulator nanr from escherichia COLI, in complex… · P4K B301 · binds ILE104, LEU107, ALA111, LEU115, PHE124, LEU127, PHE131, ILE191 and 10 more
  • 6RFX · Crystal structure of EIS2 from mycobacterium abscessus · P4K D502 · binds MSE19, ALA22, TYR23, PHE26, ARG28, PHE411
  • 6SCZ · Mycobacterium tuberculosis alanine racemase inhibited by dcs · P4K A423 · binds PRO181, ASP182, MET219, ALA220, ARG221, PRO222
  • 6UBO · Fluorogen activating protein DIB1 · P4K A203 · binds THR63, ILE75, LYS77, TRP86, GLN88
  • 7S87 · Crystal structure of dihydroorotate dehydrogenase from plasmodium falciparum in complex… · P4K A605 · binds ARG294, GLN297, GLU298, SER304, PHE384, PHE387, ASN388, THR389 and 1 more
  • 7UWT · Structure of oxygen-insensitive NAD(P)H-dependent nitroreductase NFSB_VV F70A/F108Y (ntr… · P4K B303 · binds PHE16, GLU54, LEU76, ASP77, SER195, ASP197

Residues it binds most

ALA 26, PHE 18, GLY 10, ASP 15, GLN 9, PRO 12, LEU 6, SER 9, TYR 12, ARG 9 (residue and the binding sites it lines).

Found with

  • ACT · Acetate ion
  • CIT · Citric acid
  • GOL · Glycerol
  • FMN · Flavin mononucleotide
  • CA · Calcium ion
  • ZN · Zinc ion
  • SLB · N-acetyl-beta-neuraminic acid
  • CL · Chloride ion
  • EDO · 1,2-ethanediol
  • PEG · Di(hydroxyethyl)ether
  • TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol
  • 8IE · (4R)-3-methyl-5-[(4R)-4-methyl-3,4-dihydroisoquinolin-2(1H)-yl]thieno[2,3-e][1,2,4]triazolo[4,3-c]pyrimidine

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