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Ligand · ONL

ONL · 5-oxo-L-norleucine

ONL, 5-oxo-L-norleucine (C6 H11 N O3, 145.2 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (4 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
ONL
Formula
C6 H11 N O3
Class
ligand
Structures
4
PDB entries
4

Binding sites

ONL in 4 structures; the first of them:

  • 1ECC · Escherichia COLI glutamine phosphoribosylpyrophosphate (prpp) amidotransferase complexed… · ONL A2377 · binds CYS1, ARG73, TYR74, PRO75, THR76, ALA77, GLU84, GLN86 and 8 more
  • 1ECG · Don inactivated escherichia COLI glutamine phosphoribosylpyrophosphate (prpp)… · ONL A505 · binds CYS1, TYR74, THR76, ALA77, SER79, GLN86, HIS100, ASN101 and 6 more
  • 1OFE · Glutamate Synthase from Synechocystis sp in complex with 2-Oxoglutarate and L-DON at 2.45… · ONL A2511 · binds CYS1, ARG206, PHE207, GLN219, HIS226, ASN227, GLY228, GLU229 and 3 more
  • 8I9O · ecCTPS filament bound with CTP, NADH, DON · ONL A702 · binds GLY351, GLY352, PHE353, CYS379, LEU380, GLN383, GLU403, ARG468 and 4 more

Residues it binds most

GLY 10, HIS 10, ARG 8, SER 6, ASN 6, CYS 10, GLN 10, GLU 7, TYR 8, ASP 6 (residue and the binding sites it lines).

Found with

  • ADE · Adenine
  • AKG · 2-oxoglutaric acid
  • CTP · Cytidine-5'-triphosphate
  • F3S · FE3-S4 cluster
  • FMN · Flavin mononucleotide
  • PCP · 1-alpha-pyrophosphoryl-2-alpha,3-alpha-dihydroxy-4-beta-cyclopentane-methanol-5-phosphate
  • PIN · Piperazine-N,N'-bis(2-ethanesulfonic acid)
  • MG · Magnesium ion
  • MN · Manganese (II) ion

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