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Ligand · ODW

ODW · (1~{R},2~{S},3~{S},4~{R},5~{R})-4-(hydroxymethyl)-8-azabicyclo[3.2.1]octane-1,2,3-triol

ODW, (1~{R},2~{S},3~{S},4~{R},5~{R})-4-(hydroxymethyl)-8-azabicyclo[3.2.1]octane-1,2,3-triol (C8 H15 N O4, 189.2 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within…

Component
ODW
Formula
C8 H15 N O4
Class
ligand
Structures
4
PDB entries
2

Binding sites

ODW in 4 structures; the first of them:

  • 6Y6S · Mouse Galactocerebrosidase complexed with galacto-noeurostegine GNS at pH 6.8 · ODW A701 · binds GLY48, THR92, THR93, TRP135, ASN181, GLU182, HIS237, TYR238 and 7 more
  • 6Y6T · Mouse Galactocerebrosidase complexed with galacto-noeurostegine GNS at pH 4.6 · ODW A701 · binds GLY48, THR92, THR93, TRP135, ASN181, GLU182, HIS237, TYR238 and 7 more
  • 6Y6S · Mouse galactocerebrosidase complexed with galacto-noeurostegine gns at pH 6.8 · ODW A701 · binds GLY48, THR92, THR93, TRP135, ASN181, GLU182, TYR238, GLU258 and 6 more
  • 6Y6T · Mouse galactocerebrosidase complexed with galacto-noeurostegine gns at pH 4.6 · ODW A701 · binds GLY48, THR92, THR93, TRP135, ASN181, GLU182, TYR238, GLU258 and 5 more

Residues it binds most

TRP 4, GLU 4, THR 4, TYR 4, ARG 4, ASN 4, GLY 4, SER 4, ILE 3, HIS 2 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • NI · Nickel (II) ion
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose

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