GL1X · GenesisL1 explorer

Ligand · NM9

NM9 · methyl 2-acetamido-3-O-[(2R)-1-amino-1-oxopropan-2-yl]-2-deoxy-beta-D-glucopyranoside

NM9, methyl 2-acetamido-3-O-[(2R)-1-amino-1-oxopropan-2-yl]-2-deoxy-beta-D-glucopyranoside (C12 H22 N2 O7, 306.3 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within…

Component
NM9
Formula
C12 H22 N2 O7
Class
sugar
Structures
4
PDB entries
2

Binding sites

NM9 in 4 structures; the first of them:

  • 4CFO · Structure of Lytic Transglycosylase MltC from Escherichia coli in complex with… · NM9 C1 · binds GLN217, SER226, ARG227, SER228, ALA230, MET234, GLN235, VAL237 and 3 more
  • 5AO8 · Crystal Structure of SltB3 from Pseudomonas aeruginosa in complex with… · NM9 B1 · binds GLY103, ALA104, ARG109, GLY143, MET144, GLU145, SER146, ASN147 and 1 more
  • 4CFO · Structure of lytic transglycosylase mltc from escherichia COLI in complex with… · NM9 C1 · binds GLN217, SER226, ARG227, SER228, ALA230, MET234, GLN235, VAL237 and 3 more
  • 5AO8 · Crystal structure of SLTB3 from pseudomonas aeruginosa in complex with… · NM9 B1 · binds GLY103, ALA104, ARG109, GLY143, MET144, GLU145, SER146, ASN147 and 1 more

Residues it binds most

SER 6, GLN 4, ALA 6, ARG 6, ASN 6, GLU 6, MET 6, GLY 2, TYR 4, VAL 4 (residue and the binding sites it lines).

Found with

  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • NM6 · 2-acetamido-3-O-[(2R)-1-amino-1-oxopropan-2-yl]-2-deoxy-beta-D-glucopyranose
  • CA · Calcium ion

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.