Ligand · NGK
NGK · 2-acetamido-2-deoxy-4-O-sulfo-alpha-D-galactopyranose
NGK, 2-acetamido-2-deoxy-4-O-sulfo-alpha-D-galactopyranose (C8 H15 N O9 S, 301.3 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (4 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds…
- Component
- NGK
- Formula
- C8 H15 N O9 S
- Class
- sugar
- Structures
- 4
- PDB entries
- 4
Binding sites
NGK in 4 structures; the first of them:
- 1NN2 · Three-dimensional structure of the neuraminidase of influenza virus… · NGK C6
- 1OFL · Crystal structure of chondroitinase B complexed to dermatan sulfate hexasaccharide · NGK F1 · binds TYR127, ASN128, ARG129, HIS159, CYS160, ARG161, TYR197, HIS198 and 3 more
- 2BAT · The structure of the complex between influenza virus neuraminidase and sialic acid, the… · NGK B6
- 7OZ9 · Sulfated host glycan recognition by carbohydrate sulfatases of the human gut microbiota… · NGK AAA602 · binds ASP36, ASP37, VAL87, SER88, TRP109, LYS153, HIS155, GLY181 and 8 more
Residues it binds most
HIS 3, ARG 3, ASP 2, LYS 2, ASN 3, GLY 3, SER 2, TRP 2, TYR 1, VAL 2 (residue and the binding sites it lines).
Found with
- CA · Calcium ion
- MAN · alpha-D-mannopyranose
- ASG · 2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose
- BMA · beta-D-mannopyranose
- FUL · beta-L-fucopyranose
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
- BGC · beta-D-glucopyranose
- GCD · 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid
- GCU · alpha-D-glucopyranuronic acid
- GLA · alpha-D-galactopyranose
- MXZ · 2-O-methyl-alpha-L-fucopyranose
- RAM · alpha-L-rhamnopyranose
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