Ligand · NAR
NAR · Naringenin
NAR, Naringenin (C15 H12 O5, 272.3 g/mol), in the MolNFT structures on GenesisL1: bound in 18 records (13 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.
- Component
- NAR
- Formula
- C15 H12 O5
- Class
- ligand
- Structures
- 18
- PDB entries
- 13
Binding sites
NAR in 18 structures; the first of them:
- 5WKR · Crystal structure of chalcone isomerase engineered from ancestral inference complexed… · NAR A301 · binds ARG34, MET36, VAL45, THR46, ILE95, LYS97, ILE99, TYR104 and 5 more
- 5WKS · Crystal structure of chalcone isomerase engineered from ancestral inference complexed… · NAR A301 · binds ARG34, MET36, VAL45, THR46, ILE95, LYS97, ILE99, TYR104 and 4 more
- 6G8H · Flavonoid-responsive Regulator FrrA in complex with (R,S)-Naringenin · NAR BBB1001 · binds VAL117, GLY177, GLU178, PRO180, LEU181, TYR104, PHE108, ASP113 and 5 more
- 6MS8 · Crystal Structure of Chalcone Isomerase from Medicago Truncatula Complexed with (2S)… · NAR A301 · binds ARG37, PHE48, THR49, ILE51, VAL96, LEU102, GLN106, TYR107 and 6 more
- 7BUR · Chalcone synthase from Glycine max (L.) Merr (soybean) complexed with naringenin · NAR A401 · binds THR132, SER133, GLY163, CSD164, GLU192, ILE193, THR194, VAL196 and 15 more
- 7VF0 · Crystal structure of Cyclosorus parasiticus chalcone synthase 1 (CpCHS1) complex with… · NAR A501 · binds THR138, SER139, GLY169, CYS170, GLU198, LEU199, THR200, VAL202 and 15 more
- 7YJ7 · Crystal structure of Stenoloma chusanum chalcone synthase 1 (ScCHS1) complex with… · NAR A501 · binds THR136, SER137, GLY167, CYS168, GLU196, ILE197, THR198, ILE200 and 15 more
- 8FEU · Flava 4-Reductase from Sorghum bicolor-NADP(H) and naringenin complex · NAR A401 · binds LEU93, SER133, VAL134, ALA135, TYR138, HIS173, ILE202, SER214 and 6 more
- 8GKN · Crystal structure of TuUGT202A2 (Tetur22g00270) in complex with S-naringenin · NAR A502 · binds LEU20, PHE21, HIS25, ILE82, ILE85, ALA86, ALA89, THR110 and 7 more
- 8JRD · Chalcone synthase from Glycine max (L.) Merr (soybean) complexed with naringenin and… · NAR A402 · binds THR132, SER133, GLY163, CSD164, GLU192, ILE193, THR194, VAL196 and 15 more
- 8V8M · Switchgrass Chalcone Synthase · NAR A502 · binds MET70, ILE71, ARG72, ARG331, ARG334, HIS335, ALA338, LYS325 and 2 more
- 5WKR · Crystal structure of chalcone isomerase engineered from ancestral inference complexed… · NAR A301 · binds ARG34, MET36, VAL45, THR46, ILE95, LYS97, ILE99, ALA107 and 1 more
- 5WKS · Crystal structure of chalcone isomerase engineered from ancestral inference complexed… · NAR A301 · binds ARG34, MET36, VAL45, THR46, ILE95, LYS97, ILE99, ALA107 and 2 more
- 6MS8 · Crystal structure of chalcone isomerase from medicago truncatula complexed with (2S)… · NAR A301 · binds ARG37, PHE48, THR49, ILE51, VAL96, LEU102, GLN106, TYR107 and 5 more
- 7BUR · Chalcone synthase from glycine max (L.) merr (soybean) complexed with naringenin · NAR A401 · binds SER133, CSD164, GLU192, ILE193, THR194, THR197, PHE215, GLY216 and 10 more
- 7VEZ · Crystal structure of cyclosorus parasiticus chalcone synthase 1 (CPCHS1) complex with… · NAR A501 · binds THR138, SER139, CYS170, GLU198, LEU199, THR200, THR203, PHE221 and 9 more
- 7VF0 · Crystal structure of cyclosorus parasiticus chalcone synthase 1 (CPCHS1) complex with… · NAR A501 · binds SER139, GLY169, CYS170, GLU198, LEU199, THR200, THR203, PHE221 and 9 more
Residues it binds most
THR 36, GLY 23, SER 37, ILE 37, PHE 34, LEU 34, VAL 25, ASP 25, MET 34, ARG 17 (residue and the binding sites it lines).
Found with
- COA · Coenzyme A
- MPD · (4S)-2-methyl-2,4-pentanediol
- CL · Chloride ion
- CIT · Citric acid
- FMT · Formic acid
- CWE · R-naringenin
- NAP · Nadp nicotinamide-adenine-dinucleotide phosphate
- UDP · Uridine-5'-diphosphate
- SO4 · Sulfate ion
- EDO · 1,2-ethanediol
- NHE · 2-[N-cyclohexylamino]ethane sulfonic acid
- PEG · Di(hydroxyethyl)ether
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