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Ligand · LU

LU · Lutetium (III) ion

LU, Lutetium (III) ion (Lu +3, 175.0 g/mol), in the MolNFT structures on GenesisL1: bound in 27 records (16 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
LU
Formula
Lu +3
Class
metal
Structures
27
PDB entries
16

Binding sites

LU in 27 structures; the first of them:

  • 1DUH · Crystal structure of the conserved domain IV of E. COLI 4.5S RNA · LU A1 · binds PGP75
  • 1E8X · Structural insights into phoshoinositide 3-kinase enzymatic mechanism and signalling · LU A3001 · binds ASN951, ASP964
  • 1KHV · Crystal Structure of Rabbit Hemorrhagic Disease Virus RNA-dependent RNA polymerase… · LU A517 · binds ASP250, LYS403
  • 1M3D · Structure of Type IV Collagen NC1 Domains · LU C2001 · binds GLU39, ASP148, GLU149, GLU40, ASP148
  • 1M6E · Crystal structure of salicylic acid carboxyl methyltransferase (samt) · LU X999 · binds LYS33, GLU37, THR76
  • 1PJL · Crystal structure of human m-NAD-ME in ternary complex with NAD and Lu3+ · LU A604 · binds LEU167, GLU255, ASP256, ASP279
  • 1PLU · Pectate lyase C from erwinia chrysanthemi with 1 LU+3 ion in the putative calcium binding… · LU A700 · binds ASP129, ASP131, GLU166, SER167, ASP170
  • 2PES · Urate Oxidase in complex with tris-dipicolinate Lutetium · LU A296
  • 2QMI · Structure of the octameric penicillin-binding protein homologue from Pyrococcus abyssi · LU A448 · binds ASP81

Residues it binds most

ASP 58, GLU 45, LEU 18, LYS 18, TYR 6, ILE 5, ASN 4, DA 4, DC 2, THR 3 (residue and the binding sites it lines).

Found with

  • EDO · 1,2-ethanediol
  • GOL · Glycerol
  • ATP · Adenosine-5'-triphosphate
  • AZA · 8-azaxanthine
  • DO3 · 10-((2R)-2-hydroxypropyl)-1,4,7,10-tetraazacyclododecane 1,4,7-triacetic acid
  • NAD · Nicotinamide-adenine-dinucleotide
  • PDC · Pyridine-2,6-dicarboxylic acid
  • PDK · (10S,13R)-3-{2-[{2-[bis(carboxymethyl)amino]ethyl}(carboxymethyl)amino]ethyl}-10-hydroxy-5,16-dioxo-13-(tetradecanoyloxy)-9,11,15-trioxa-3,6-diaza-10-phosphanonacosan-1-oic acid 10-oxide
  • SAH · S-adenosyl-L-homocysteine
  • SAL · 2-hydroxybenzoic acid
  • MG · Magnesium ion
  • NA · Sodium ion

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