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Ligand · LA

LA · Lanthanum (III) ion

LA, Lanthanum (III) ion (La +3, 138.9 g/mol), in the MolNFT structures on GenesisL1: bound in 18 records (13 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
LA
Formula
La +3
Class
metal
Structures
18
PDB entries
13

Binding sites

LA in 18 structures; the first of them:

  • 5KIJ · Crystal structure of the class I human endoplasmic reticulum 1,2-alpha-mannosidase and… · LA A701 · binds GLU467, GLU602, GLU663, THR688
  • 5KKB · Structure of mouse Golgi alpha-1,2-mannosidase IA and Man9GlcNAc2-PA complex · LA A711 · binds THR635
  • 6DAM · Crystal structure of lanthanide-dependent methanol dehydrogenase XoxF from… · LA A701 · binds GLU197, ASN285, ASP327, ASP329
  • 6HVQ · The structure of Dps from Listeria innocua soaked before soaking experiments with Zn, Co… · LA A201 · binds ASP130, ASP130, ASP130

Residues it binds most

GLU 83, ASP 70, ASN 23, SER 15, THR 14, HIS 10, LEU 8, LYS 5, TRP 3, ILE 2 (residue and the binding sites it lines).

Found with

  • SO4 · Sulfate ion
  • 1PS · 3-pyridinium-1-ylpropane-1-sulfonate
  • BMA · beta-D-mannopyranose
  • MAN · alpha-D-mannopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • BU1 · 1,4-butanediol
  • PQQ · Pyrroloquinoline quinone
  • NA · Sodium ion
  • 4OL · N,N'-butane-1,4-diylbis[1-hydroxy-N-(3-{[(1-hydroxy-6-oxo-1,6-dihydropyridin-2-yl)carbonyl]amino}propyl)-6-oxo-1,6-dihydropyridine-2-carboxamide]
  • PIN · Piperazine-N,N'-bis(2-ethanesulfonic acid)
  • CL · Chloride ion
  • CIT · Citric acid

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