MolNFT v2 · #152690 · protein
The structure of Dps from Listeria innocua soaked before soaking experiments with Zn, Co and La
6HVQ: “The structure of Dps from Listeria innocua soaked before soaking experiments with Zn, Co and La”. X-ray diffraction at 1.9, 1 ligand (LA). MolNFT v2 #152690 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6HVQ
- Type
- protein
- Length
- 908 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.9
- Source
- Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)
- UniProt
- P80725
- Ligands
- LA
Structure
x-ray diffraction · resolution 1.9 · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 152 | — | P80725 |
| B, C, D, F | — | protein | 151 | — | P80725 |
| E | — | protein | 152 | — | P80725 |
Ligands and binding sites
- LA · Lanthanum (III) ion · metal · 50 copies · chains A, C, E, B, D, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6HVQ · The structure of dps from listeria innocua soaked before soaking experiments with zn, co… · the same entry in another collection · chain F against F, TM-score 1.00
- P80725 · AlphaFold monomer V2.0 prediction for DNA protection during starvation protein (P80725) · a predicted model of the same protein · chain C against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P80725
- Elsewhere: RCSB PDB 6HVQ · PDBe 6HVQ · UniProt P80725
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