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Ligand · L6S

L6S · 6-O-sulfo-alpha-L-galactopyranose

L6S, 6-O-sulfo-alpha-L-galactopyranose (C6 H12 O9 S, 260.2 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
L6S
Formula
C6 H12 O9 S
Class
ligand
Structures
3
PDB entries
3

Binding sites

L6S in 3 structures; the first of them:

  • 7SNO · Structure of Bacple_01701(H214N), a 6-O-galactose porphyran sulfatase · L6S B2 · binds ASP111, HIS156, GLY157, HIS434, SER469, TRP470
  • 8EW1 · Structure of Bacple_01703-E145L · L6S D2 · binds ASN61, LYS63, TRP64, ARG67, PHE106, TRP134, SER136, TRP143 and 2 more
  • 7LJ2 · Structure of exo-L-galactose-6-sulfatase BUS1_11 from bacteroides uniformis in complex… · L6S C2 · binds ASP37, ASP38, ILE79, SER80, LEU101, LYS128, HIS130, GLN150 and 10 more

Residues it binds most

ASP 4, HIS 4, TRP 7, ARG 6, LYS 6, SER 7, ASN 3, GLN 3, PHE 3, ILE 3 (residue and the binding sites it lines).

Found with

  • GAL · beta-D-galactopyranose
  • CA · Calcium ion
  • NA · Sodium ion
  • CL · Chloride ion
  • ACT · Acetate ion
  • EDO · 1,2-ethanediol
  • GOL · Glycerol
  • PEG · Di(hydroxyethyl)ether
  • PG4 · Tetraethylene glycol
  • PGE · Triethylene glycol

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