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Ligand · JN3

JN3 · Chenodeoxycholic acid

JN3, Chenodeoxycholic acid (C24 H40 O4, 392.6 g/mol), in the MolNFT structures on GenesisL1: bound in 5 records (4 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
JN3
Formula
C24 H40 O4
Class
ligand
Structures
5
PDB entries
4

Binding sites

JN3 in 5 structures; the first of them:

  • 6HL1 · Crystal Structure of Farnesoid X receptor (FXR) with bound NCoA-2 peptide and CDCA · JN3 A501 · binds MET265, LEU287, MET290, ALA291, HIS294, MET328, PHE329, ARG331 and 8 more
  • 8DML · Vibrio parahaemolyticus VtrA/VtrC complex bound to the bile salt chenodeoxycholate · JN3 B201 · binds TYR39, HIS50, ILE67, ILE69, TYR81, VAL83, VAL106, TYR118 and 5 more
  • 9ETC · Crystal structure of recombinant chicken liver Bile Acid Binding Protein (cL-BABP) in… · JN3 A201 · binds LEU22, VAL50, ASN61, PHE63, ILE71, THR73, ASP75, LYS77 and 9 more
  • 6HL1 · Crystal structure of farnesoid X receptor (fxr) with bound ncoa-2 peptide and cdca · JN3 A501 · binds MET265, LEU287, MET290, ALA291, HIS294, MET328, PHE329, ARG331 and 8 more
  • 6IE9 · Ramr in complex with chenodeoxycholic acid · JN3 A200 · binds TYR59, LEU66, MET70, THR85, ILE88, TYR92, ALA110, SER137 and 6 more

Residues it binds most

ILE 11, TYR 9, LEU 9, PHE 11, MET 5, VAL 6, HIS 8, THR 5, ARG 5, SER 6 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • SO4 · Sulfate ion
  • EDO · 1,2-ethanediol
  • PG4 · Tetraethylene glycol

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