GL1X · GenesisL1 explorer

Ligand · J8F

J8F · 4-[(~{Z})-1-cyano-2-[4-[2-hydroxyethyl(methyl) amino]phenyl]ethenyl]benzenecarbonitrile

J8F, 4-[(~{Z})-1-cyano-2-[4-[2-hydroxyethyl(methyl) amino]phenyl]ethenyl]benzenecarbonitrile (C19 H17 N3 O, 303.4 g/mol), in the MolNFT structures on GenesisL1: bound in 10 records (5 PDB entries). Every binding site with its residues…

Component
J8F
Formula
C19 H17 N3 O
Class
ligand
Structures
10
PDB entries
5

Binding sites

J8F in 10 structures; the first of them:

  • 7EOG · Crystal structure of the Pepper aptamer in complex with HBC, iridium hexammine soak · J8F A102 · binds U8, G9, G10, C33, U40, G41, U42, C43
  • 7EOH · Crystal structure of the Pepper aptamer in complex with HBC · J8F A101 · binds U8, G9, G10, C33, U40, G41, U42, C43
  • 7EOI · Crystal structure of the Pepper aptamer in complex with HBC, manganese soak · J8F A101 · binds U8, G9, G10, C33, U40, G41, U42, C43
  • 7EOJ · Crystal structure of the Pepper aptamer in complex with HBC, cesium soak · J8F A101 · binds U8, G9, G10, C33, U40, G41, U42, C43
  • 7SZU · Crystal structure of Pepper RNA aptamer in complex with HBC ligand and Fab BL3-6 · J8F R103 · binds C14, U21, G22, U23, U53, G54, G55
  • 7EOG · Crystal structure of the pepper aptamer in complex with hbc, iridium hexammine soak · J8F A102 · binds U8, G9, G10, C33, U40, G41, U42, C43
  • 7EOH · Crystal structure of the pepper aptamer in complex with hbc · J8F A101 · binds U8, G9, G10, C33, U40, G41, U42, C43
  • 7EOI · Crystal structure of the pepper aptamer in complex with hbc, manganese soak · J8F A101 · binds U8, G9, G10, C33, U40, G41, U42, C43
  • 7EOJ · Crystal structure of the pepper aptamer in complex with hbc, cesium soak · J8F A101 · binds U8, G9, G10, C33, U40, G41, U42, C43
  • 7SZU · Crystal structure of pepper RNA aptamer in complex with hbc ligand and Fab BL3-6 · J8F R103 · binds C14, U21, G22, U23, U53, G54, G55

Residues it binds most

G 10, U 10, C 10 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • GTP · Guanosine-5'-triphosphate
  • IRI · Iridium hexammine ion
  • CS · Cesium ion
  • MN · Manganese (II) ion
  • NA · Sodium ion

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.