GL1X · GenesisL1 explorer

Ligand · HPY

HPY · 4-hydroxy-3,4-dihydro-1H-pyrimidin-2-one

HPY, 4-hydroxy-3,4-dihydro-1H-pyrimidin-2-one (C4 H6 N2 O2, 114.1 g/mol), in the MolNFT structures on GenesisL1: bound in 6 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
HPY
Formula
C4 H6 N2 O2
Class
ligand
Structures
6
PDB entries
3

Binding sites

HPY in 6 structures; the first of them:

  • 1K70 · The Structure of Escherichia coli Cytosine Deaminase bound to… · HPY A501 · binds HIS61, HIS63, LEU81, PHE154, GLN156, ILE183, HIS214, GLU217 and 4 more
  • 1P6O · The crystal structure of yeast cytosine deaminase bound to… · HPY A411 · binds ILE33, ASN51, HIS62, GLY63, GLU64, LEU88, SER89, PRO90 and 6 more
  • 2O3K · Yeast Cytosine Deaminase D92E Triple Mutant bound to transition state analogue HPY · HPY A411 · binds ILE33, ASN51, HIS62, GLY63, GLU64, LEU88, SER89, PRO90 and 6 more
  • 1K70 · The structure of escherichia COLI cytosine deaminase bound to 4… · HPY A501 · binds HIS61, HIS63, LEU81, PHE154, GLN156, ILE183, HIS214, GLU217 and 4 more
  • 1P6O · The crystal structure of yeast cytosine deaminase bound to… · HPY A411 · binds ILE33, ASN51, HIS62, GLY63, GLU64, LEU88, SER89, PRO90 and 6 more
  • 2O3K · Yeast cytosine deaminase D92E triple mutant bound to transition state analogue hpy · HPY A411 · binds ILE33, ASN51, HIS62, GLY63, GLU64, LEU88, SER89, PRO90 and 6 more

Residues it binds most

ILE 10, CYS 8, HIS 10, ASP 10, GLU 10, PHE 10, TRP 10, ASN 8, GLY 8, LEU 8 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • ZN · Zinc ion
  • FE · Fe (III) ion
  • ACY · Acetic acid

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.