Ligand · HMB

HMB · (4S)-4-hydroxy-4-methoxybutanoic acid

HMB, (4S)-4-hydroxy-4-methoxybutanoic acid (C5 H10 O4, 134.1 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component: HMB
Formula: C5 H10 O4
Class: ligand
Structures: 2
PDB entries: 2

Binding sites

HMB in 2 structures; the first of them:

1PPG · The refined 2.3 ångströms crystal structure of human leukocyte elastase in a complex with… · HMB I1 · binds VAL216, ARG217, GLY218, GLY219, ALA2, ALA3
3F7O · Crystal structure of cuticle-degrading protease from paecilomyces lilacinus (PL646) · HMB A285 · binds GLY105, SER106, TYR107, ALA2

Residues it binds most

ALA 3, GLY 3, SER 2, TYR 2, ARG 1, VAL 1 (residue and the binding sites it lines).

Found with

0QE · Chloromethane
CA · Calcium ion
BMA · beta-D-mannopyranose
FUC · alpha-L-fucopyranose
GAL · beta-D-galactopyranose
GLC · alpha-D-glucopyranose
MAN · alpha-D-mannopyranose
NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
NDG · 2-acetamido-2-deoxy-alpha-D-glucopyranose

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