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Ligand · GX0

GX0 · 1-[(4-chlorophenyl)methyl]-2-(pyrrolidin-1-ylmethyl) benzimidazole

GX0, 1-[(4-chlorophenyl)methyl]-2-(pyrrolidin-1-ylmethyl) benzimidazole (C19 H20 Cl N3, 325.8 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues…

Component
GX0
Formula
C19 H20 Cl N3
Class
ligand
Structures
2
PDB entries
1

Binding sites

GX0 in 2 structures; the first of them:

  • 7D4P · Structure of human TRPC5 in complex with clemizole · GX0 A801 · binds TYR374, GLY413, PHE414, GLY417, GLU418, ASP439, MET442, ASN443 and 8 more
  • 7D4P · Structure of human TRPC5 in complex with clemizole · GX0 A801 · binds TYR374, PHE414, GLY417, GLU418, ASP439, MET442, ASN443, TYR446 and 4 more

Residues it binds most

TYR 8, ASN 8, GLY 8, LEU 8, SER 8, ARG 8, ASP 8, GLU 8, MET 8, PHE 8 (residue and the binding sites it lines).

Found with

  • POV · (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate
  • PTY · Phosphatidylethanolamine
  • Y01 · Cholesterol hemisuccinate
  • YZY · (2S)-2-(hexadecanoyloxy)-3-hydroxypropyl (9Z)-octadec-9-enoate
  • CA · Calcium ion
  • ZN · Zinc ion

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