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Ligand · GTM

GTM · methyl 4-thio-beta-D-glucopyranoside

GTM, methyl 4-thio-beta-D-glucopyranoside (C7 H14 O5 S, 210.2 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
GTM
Formula
C7 H14 O5 S
Class
sugar
Structures
4
PDB entries
2

Binding sites

GTM in 4 structures; the first of them:

  • 1OCB · Structure of the wild-type cellobiohydrolase Cel6A from Humicolas insolens in complex… · GTM C1 · binds TRP277, ALA279, PRO325
  • 1P6W · Crystal structure of barley alpha-amylase isozyme 1 (AMY1) in complex with the substrate… · GTM B1 · binds TYR380, HIS395, GLY396, ASN397, ASP398
  • 1OCB · Structure of the wild-type cellobiohydrolase CEL6A from humicolas insolens in complex… · GTM C1 · binds TRP277, ALA279, PRO325
  • 1P6W · Crystal structure of barley alpha-amylase isozyme 1 (AMY1) in complex with the substrate… · GTM B1 · binds TYR380, HIS395, GLY396, ASN397, ASP398

Residues it binds most

ALA 8, TRP 8, ASP 6, GLY 6, PRO 6, TYR 6, ARG 4, ASN 4, GLU 4, LYS 4 (residue and the binding sites it lines).

Found with

  • BGC · beta-D-glucopyranose
  • FLG · Fluoresceinylthioureido
  • SGC · 4-thio-beta-D-glucopyranose
  • CA · Calcium ion
  • GDA · 4-amino-4-deoxy-beta-D-glucopyranose
  • GLC · alpha-D-glucopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • GOL · Glycerol

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