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Ligand · GS1

GS1 · 1-thio-beta-D-glucopyranose

GS1, 1-thio-beta-D-glucopyranose (C6 H12 O5 S, 196.2 g/mol), in the MolNFT structures on GenesisL1: bound in 7 records (5 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found…

Component
GS1
Formula
C6 H12 O5 S
Class
sugar
Structures
7
PDB entries
5

Binding sites

GS1 in 7 structures; the first of them:

  • 5O59 · Cellobiohydrolase Cel7A from T. atroviride · GS1 A606 · binds TRP38, TYR51, THR81, TYR82, ASN101, LYS181, ASN200
  • 6JGK · Crystal structure of barley exohydrolaseI W434F mutant in complex with… · GS1 B1 · binds TRP286, ARG291
  • 8K5I · The structure of SenA in complex with N,N,N-trimethyl-histidine and thioglucose · GS1 A503 · binds ASN63, GLU68, HIS71, SER112, HIS167, HIS171, ALA174, TYR177 and 2 more
  • 5O59 · Cellobiohydrolase CEL7A from T. atroviride · GS1 A606 · binds TRP38, TYR51, THR81, TYR82, ASN101, LYS181, ASN200
  • 6JG1 · Crystal structure of barley exohydrolasei wildtype in complex with 4I… · GS1 B1 · binds TRP286, GLU287, ARG291
  • 6JGK · Crystal structure of barley exohydrolasei W434F mutant in complex with… · GS1 B1 · binds TRP286, ARG291
  • 6LBB · Crystal structure of barley exohydrolasei W434A mutant in complex with… · GS1 B1 · binds ALA434, GLN435, LYS493

Residues it binds most

TRP 19, ARG 11, TYR 13, ASN 9, ASP 4, THR 8, HIS 5, GLU 6, LYS 5, PRO 4 (residue and the binding sites it lines).

Found with

  • GOL · Glycerol
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • SGC · 4-thio-beta-D-glucopyranose
  • BGC · beta-D-glucopyranose
  • SO4 · Sulfate ion
  • 1PE · Pentaethylene glycol
  • ACT · Acetate ion
  • PEG · Di(hydroxyethyl)ether
  • NI · Nickel (II) ion
  • GLC · alpha-D-glucopyranose
  • BTB · 2-[bis-(2-hydroxy-ethyl)-amino]-2-hydroxymethyl-propane-1,3-diol
  • AVJ · N,N,N-trimethyl-histidine

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