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Ligand · GL0

GL0 · beta-D-gulopyranose

GL0, beta-D-gulopyranose (C6 H12 O6, 180.2 g/mol), in the MolNFT structures on GenesisL1: bound in 10 records (5 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
GL0
Formula
C6 H12 O6
Class
sugar
Structures
10
PDB entries
5

Binding sites

GL0 in 10 structures; the first of them:

  • 2OBS · Crystal Structures of P Domain of Norovirus VA387 in Complex with Blood Group… · GL0 B1
  • 2W9L · Canine adenovirus type 2 fibre head in complex with car domain D1 and sialic acid · GL0 b1 · binds ARG515
  • 3D12 · Crystal Structures of Nipah Virus G Attachment Glycoprotein in Complex with its Receptor… · GL0 F3
  • 3T91 · Structure of the Phosphatase Domain of the Cell Fate Determinant SpoIIE from Bacillus… · GL0 B900 · binds THR595, MET614, MET615, GLU616, TYR622, VAL593, THR595, MET614 and 3 more
  • 3T9Q · Structure of the Phosphatase Domain of the Cell Fate Determinant SpoIIE from Bacillus… · GL0 A5 · binds VAL593, SER594, THR595, MET614, MET615, GLU616, TYR622, VAL593 and 6 more
  • 2OBS · Crystal structures of P domain of norovirus VA387 in complex with blood group… · GL0 B1
  • 2W9L · Canine adenovirus type 2 fibre head in complex with car domain D1 and sialic acid · GL0 b1 · binds ARG515
  • 3D12 · Crystal structures of nipah virus G attachment glycoprotein in complex with its receptor… · GL0 F3
  • 3T91 · Structure of the phosphatase domain of the cell fate determinant spoiie from bacillus… · GL0 B900 · binds THR595, MET614, MET615, GLU616, TYR622, VAL593, THR595, MET614 and 3 more
  • 3T9Q · Structure of the phosphatase domain of the cell fate determinant spoiie from bacillus… · GL0 A5 · binds VAL593, SER594, THR595, MET614, MET615, GLU616, TYR622, VAL593 and 6 more

Residues it binds most

MET 4, GLU 4, THR 4, TYR 4, VAL 4, SER 2, ARG 2 (residue and the binding sites it lines).

Found with

  • MN · Manganese (II) ion
  • MAN · alpha-D-mannopyranose
  • GXL · alpha-L-galactopyranose
  • A2G · 2-acetamido-2-deoxy-alpha-D-galactopyranose
  • BGC · beta-D-glucopyranose
  • BMA · beta-D-mannopyranose
  • FUC · alpha-L-fucopyranose
  • GAL · beta-D-galactopyranose
  • GLC · alpha-D-glucopyranose
  • LXB · 2-acetamido-2-deoxy-beta-D-gulopyranose
  • LXZ · 2-acetamido-2-deoxy-alpha-D-idopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose

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