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Ligand · LXB

LXB · 2-acetamido-2-deoxy-beta-D-gulopyranose

LXB, 2-acetamido-2-deoxy-beta-D-gulopyranose (C8 H15 N O6, 221.2 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
LXB
Formula
C8 H15 N O6
Class
sugar
Structures
3
PDB entries
2

Binding sites

LXB in 3 structures; the first of them:

  • 3D12 · Crystal Structures of Nipah Virus G Attachment Glycoprotein in Complex with its Receptor… · LXB I1 · binds ARG495, PHE496, ASN529, ARG112
  • 8AXI · Sialidases and Fucosidases of Akkermansia muciniphila are key for rapid growth on colonic… · LXB C1 · binds TRP298, HIS411
  • 3D12 · Crystal structures of nipah virus G attachment glycoprotein in complex with its receptor… · LXB I1 · binds ARG495, PHE496, ASN529, ARG112

Residues it binds most

ARG 2, ASN 2, HIS 2, PHE 2, TRP 2 (residue and the binding sites it lines).

Found with

  • GXL · alpha-L-galactopyranose
  • BGC · beta-D-glucopyranose
  • BMA · beta-D-mannopyranose
  • GL0 · beta-D-gulopyranose
  • GLC · alpha-D-glucopyranose
  • LXZ · 2-acetamido-2-deoxy-alpha-D-idopyranose
  • MAN · alpha-D-mannopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • NGA · 2-acetamido-2-deoxy-beta-D-galactopyranose
  • NGZ · 2-acetamido-2-deoxy-alpha-L-glucopyranose
  • SO4 · Sulfate ion
  • DAN · 2-deoxy-2,3-dehydro-N-acetyl-neuraminic acid

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