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Ligand · GAK

GAK · [2Ga-2S] cluster

GAK, [2Ga-2S] cluster (Ga2 S2, 203.6 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
GAK
Formula
Ga2 S2
Class
ligand
Structures
2
PDB entries
2

Binding sites

GAK in 2 structures; the first of them:

  • 5AUK · Crystal structure of the Ga-substituted Ferredoxin · GAK A101 · binds TYR37, SER38, CYS39, ARG40, ALA41, GLY42, ALA43, CYS44 and 4 more
  • 7FIX · Cryo-EM structure of cyanobacterial photosystem I in the presence of ferredoxin and… · GAK R1101 · binds PHE38, SER39, CYS40, ARG41, GLY43, ALA44, CYS45, SER46 and 4 more

Residues it binds most

CYS 4, SER 4, ALA 4, ARG 4, GLY 4, LEU 4, THR 4, PHE 3, TYR 1 (residue and the binding sites it lines).

Found with

  • BCR · Beta-carotene
  • BEN · Benzamidine
  • CL0 · Chlorophyll A isomer
  • CLA · Chlorophyll A
  • DGD · Digalactosyl diacyl glycerol (dgdg)
  • LHG · 1,2-dipalmitoyl-phosphatidyl-glycerole
  • PQN · Phylloquinone
  • SF4 · Iron/sulfur cluster
  • UNL · Unknown ligand
  • CA · Calcium ion
  • SO4 · Sulfate ion

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